CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.14435.1.S1_at

Gene name 60S ribosomal protein L22-2

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.14435.1.S1_at AY109360.1 60S ribosomal protein L22-2 - 3e-35 At3g05560 60S ribosomal protein L22-2 (RPL22B) S.X. H.G.
0.80 94.0 Zm.4720.1.S1_at AY108931.1 - - 7e-2 At5g13910 LEP (LEAFY PETIOLE) S.X. H.G.
0.67 85.8 Zm.4586.1.A1_at AW499317 - - 4e-2 At2g06420 unknown protein S.X. H.G.
0.56 74.4 Zm.10092.1.A1_at AY105279.1 hypothetical protein LOC100217059 - 7e-3 At3g43520 unknown protein S.X. H.G.
0.53 69.1 Zm.4988.1.A1_at AY111117.1 Hypothetical protein LOC100193664 - 2e+0 At5g20900 JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12) S.X. H.G.
0.32 33.4 Zm.16517.1.A1_at CO534088 - - 1e+0 At2g05430 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.0 95.8 GSM205369 Mo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7 95.4 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7 95.4 GSM205373 Mo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.7 95.4 GSM253244 ZM_12h_Mock_3inf_I GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM205371 Mo17xB73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.5 95.1 GSM253245 ZM_12h_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.4 94.9 GSM205366 B73 13 DAP endosperm tissue biological replicate 1 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.4 94.9 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.3 94.7 GSM205372 B73xMo17 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
3.2 94.5 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 1e-162 573 Zm.14435.2.A1_at CF633613 hypothetical protein LOC100192778 - 4e-29 At3g05560 60S ribosomal protein L22-2 (RPL22B) C.G. S.X.
0.34 3e-58 226 Zm.1964.1.A1_at AY104727.1 - - 4e-7 At4g37670 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein C.G. S.X.
0.07 7e-22 105 Zm.4212.2.S1_a_at BI543125 60S ribosomal protein L22-2 - 2e-13 At3g05560 60S ribosomal protein L22-2 (RPL22B) C.G. S.X.
0.01 1e-1 38 Zm.11779.1.A1_at CO527258 hypothetical protein LOC100217298 - 3e+0 At3g47800 aldose 1-epimerase family protein C.G. S.X.
0.00 5e-1 36 Zm.370.1.S1_at AF023159.1 starch synthase DULL1 - 1e-21 At1g11720 ATSS3 (starch synthase 3) C.G. S.X.
0.01 2e+0 34 Zm.9580.1.A1_at BM332976 hypothetical protein LOC100277774 - 6e+0 At5g24155 squalene monooxygenase, putative / squalene epoxidase, putative C.G. S.X.
0.01 2e+0 34 Zm.9580.1.A1_a_at BM332976 hypothetical protein LOC100277774 - 6e+0 At5g24155 squalene monooxygenase, putative / squalene epoxidase, putative C.G. S.X.
0.01 2e+0 34 Zm.8987.1.A1_a_at CK347996 hypothetical protein LOC100192764 /// vacuolar protein sorting 29 - 3e-15 At3g47810 MAG1 (MAIGO 1) C.G. S.X.
0.01 2e+0 34 Zm.890.2.A1_a_at CA400673 GSDL-motif lipase - 5e+0 At5g55710 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 3e-35 151 Arabidopsis thaliana At3g05560 819722 60S ribosomal protein L22-2 (RPL22B) F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, nucleolus, plasma membrane;MFOP - - - C.G. S.X.
0.13 2e-24 115 Glycine max Gma.5626.1.S1_s_at CD394365 - - 4e-41 At5g27770 60S ribosomal protein L22 (RPL22C) C.G. S.X.
0.22 3e-61 236 Hordeum vulgare Contig13186_at Contig13186 - - 2e+0 At2g26340 unknown protein C.G. S.X.
0.41 8e-130 466 Oryza sativa Os.7319.1.S1_at - - - 0 C.G. S.X.
0.11 3e-17 91 Populus trichocarpa Ptp.4147.1.S1_s_at CV260818 - - 1e-44 At3g05560 60S ribosomal protein L22-2 (RPL22B) C.G. S.X.
0.45 1e-117 424 Triticum aestivum Ta.28028.1.S1_at BT009277.1 - - 7e-2 At2g22910 GCN5-related N-acetyltransferase (GNAT) family protein / amino acid kinase family protein C.G. S.X.
0.17 2e-36 153 Vitis vinifera 1608604_at BQ796866 hypothetical protein LOC100260136 - 7e-24 At3g05560 60S ribosomal protein L22-2 (RPL22B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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