Gene omics information

Query gene ID	Zm.14400.1.S1_at
Gene name	hypothetical protein LOC100191706
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.14400.1.S1_at	AW000473	hypothetical protein LOC100191706	-	8e-52	At4g02720	unknown protein	S.X.	H.G.	Please select
0.80	94.0	Zm.15800.5.A1_x_at	CA404204	-	-	1e-5	At4g13780	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative	S.X.	H.G.	Please select
0.73	89.9	Zm.6054.1.A1_at	AW497492	-	-	3e+0	At5g25490	zinc finger (Ran-binding) family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.5517.1.A1_at	BE051194	hypothetical protein LOC100273563	-	2e-1	At1g15740	leucine-rich repeat family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.14489.1.S1_at	BQ527929	MFS18 protein	-	1e+0	At5g67510	60S ribosomal protein L26 (RPL26B)	S.X.	H.G.	Please select
0.40	48.5	Zm.9023.1.A1_at	AY109177.1	-	-	4e-14	At4g02480	AAA-type ATPase family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.9	98.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.1	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.20	9e-93	339	Zm.1951.1.S1_at	BE123243	Hypothetical protein LOC100191706	-	2e+0	At5g49020	PRMT4A (PROTEIN ARGININE METHYLTRANSFERASE 4A)	C.G.	S.X.	Please select
0.03	3e-3	42	Zm.16171.1.A1_at	CF633781	profilin A	-	4e-10	At4g29350	PFN2 (PROFILIN 2)	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.12696.2.A1_at	CO532520	R2R3MYB-domain protein	-	2e-7	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.12696.2.S1_a_at	BU571552	hypothetical protein LOC100194394 /// hypothetical protein LOC100272660	-	2e-7	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	C.G.	S.X.	Please select
0.02	1e-2	40	Zm.12696.2.S1_at	BU571552	hypothetical protein LOC100194394	-	2e-7	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	C.G.	S.X.	Please select
0.03	1e-2	40	Zm.11547.1.S1_at	CA827895	hypothetical protein LOC100276375	-	1e+1	At5g41520	40S ribosomal protein S10 (RPS10B)	C.G.	S.X.	Please select
0.03	5e-2	38	Zm.19248.1.S1_at	CO530787	Hypothetical protein LOC100193820	-	7e-1	At3g47850	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.7914.1.A1_at	AY103800.1	hypothetical protein LOC100277669	-	5e-11	At3g21175	ZML1 (ZIM-LIKE 1)	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.7914.1.A1_a_at	AY103800.1	hypothetical protein LOC100277669	-	5e-11	At3g21175	ZML1 (ZIM-LIKE 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.25	8e-52	204	Arabidopsis thaliana	At4g02720	828193	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-2	42	Glycine max	Gma.17868.2.A1_s_at	BQ253153	-	-	2e-45	At5g62690	TUB2	C.G.	S.X.	Please select
0.42	2e-158	557	Hordeum vulgare	Contig11299_at	Contig11299	-	-	3e-40	At4g02720	unknown protein	C.G.	S.X.	Please select
0.42	1e-147	523	Oryza sativa	Os.19563.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.27	5e-54	212	Populus trichocarpa	PtpAffx.53949.1.S1_at	CK091438	hypothetical protein	-	3e-58	At4g02720	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.30	3e-39	163	Triticum aestivum	TaAffx.123123.1.S1_at	CA650839	-	-	3e-1	At4g22513	-	C.G.	S.X.	Please select
0.32	1e-66	252	Vitis vinifera	1606469_at	CB972245	hypothetical protein LOC100261321	-	3e-60	At4g02720	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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