CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.14291.1.S1_at

Gene name 40S ribosomal protein S30

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.14291.1.S1_at BE056944 40S ribosomal protein S30 - 8e-18 At4g29390 40S ribosomal protein S30 (RPS30B) S.X. H.G.
0.67 85.8 Zm.11862.1.A1_at AW566292 hypothetical protein LOC100275637 - 2e-1 At2g40440 BTB/POZ domain-containing protein S.X. H.G.
0.50 65.7 Zm.1937.1.S1_at CN845484 hypothetical protein LOC100277662 - 5e+0 At3g50800 unknown protein S.X. H.G.
0.44 55.7 Zm.10105.1.A1_at BM379807 - - 5e+0 At4g11870 unknown protein S.X. H.G.
0.33 36.0 Zm.564.1.S1_a_at AF244704.1 glutathione S-transferase GST 39 - 3e-2 At2g36640 ATECP63 (EMBRYONIC CELL PROTEIN 63) S.X. H.G.
0.03 1.1 Zm.4338.1.A1_at CF638243 peroxidase 72 - 1e-8 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
5.5 97.1 GSM253252 ZM_24h_Mock_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
4.4 96.2 GSM253245 ZM_12h_Mock_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.4 96.2 GSM323170 Zm_SG200Dpep1_24hpi_I GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
4.1 95.9 GSM323172 Zm_SG200Dpep1_24hpi_III GSE12892 Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
4.0 95.8 GSM258532 DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 1 GSE10243 Profiling expression changes caused by a segmental aneuploid in maize
3.9 95.7 GSM258537 Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4 GSE10243 Profiling expression changes caused by a segmental aneuploid in maize
3.9 95.7 GSM258538 DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 4 GSE10243 Profiling expression changes caused by a segmental aneuploid in maize
3.6 95.2 GSM253247 ZM_12h_SG200_3inf_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.6 95.2 GSM258536 DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 3 GSE10243 Profiling expression changes caused by a segmental aneuploid in maize
3.5 95.1 GSM258535 Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3 GSE10243 Profiling expression changes caused by a segmental aneuploid in maize
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 3e-68 258 Zm.16346.1.A1_at AY108153.1 hypothetical protein LOC100191168 /// 40S ribosomal protein S30 - 2e-8 At4g29390 40S ribosomal protein S30 (RPS30B) C.G. S.X.
0.22 2e-60 232 Zm.6629.1.S1_at BQ034792 40S ribosomal protein S30 - 2e-24 At4g29390 40S ribosomal protein S30 (RPS30B) C.G. S.X.
0.03 2e-1 36 Zm.6532.7.A1_x_at BM075609 dehydrin 13 - 4e-1 At2g21490 LEA (DEHYDRIN LEA) C.G. S.X.
0.01 7e-1 34 Zm.6152.1.S1_at AI676863 RING zinc finger protein-like /// small basic membrane intrinsic protein1b - 4e-15 At3g29270 ubiquitin-protein ligase C.G. S.X.
0.02 7e-1 34 Zm.610.1.A1_at AF326498.1 small basic membrane intrinsic protein1b - 1e-1 At4g16360 AMP-activated protein kinase C.G. S.X.
0.01 7e-1 34 Zm.433.1.A1_at AF069908.1 pyruvate dehydrogenase2 - 1e-43 At5g50850 MAB1 (MACCI-BOU) C.G. S.X.
0.01 7e-1 34 Zm.13605.1.S1_at CO522133 serine--glyoxylate aminotransferase - 1e-14 At2g13360 AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE) C.G. S.X.
0.01 3e+0 32 Zm.8907.1.A1_at BG320013 chlorophyll a-b binding protein 4 - 8e-1 At1g45474 LHCA5 C.G. S.X.
0.01 3e+0 32 Zm.8907.1.A1_x_at BG320013 light harvesting complex a/b protein4 - 8e-1 At1g45474 LHCA5 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.29 8e-18 91 Arabidopsis thaliana At4g29390 829060 40S ribosomal protein S30 (RPS30B) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, nucleolus;MOFPAV - - - C.G. S.X.
0.17 3e-27 123 Glycine max GmaAffx.88725.1.A1_at CK605999 - - 1e-18 At4g29390 40S ribosomal protein S30 (RPS30B) C.G. S.X.
0.27 9e-81 299 Hordeum vulgare Contig253_s_at Contig253 - - 5e-15 At4g29390 40S ribosomal protein S30 (RPS30B) C.G. S.X.
0.27 5e-70 266 Oryza sativa Os.5470.1.S1_at - - - 0 C.G. S.X.
0.21 1e-17 91 Populus trichocarpa Ptp.1364.1.S1_a_at CV248495 hypothetical protein - 7e-36 At4g29390 40S ribosomal protein S30 (RPS30B) C.G. S.X.
0.70 0 864 Triticum aestivum TaAffx.84948.1.S1_at CA626902 - - 7e-20 At4g29390 40S ribosomal protein S30 (RPS30B) C.G. S.X.
0.23 5e-29 127 Vitis vinifera 1616201_at CF205134.1 hypothetical protein LOC100252467 - 3e-34 At2g19750 40S ribosomal protein S30 (RPS30A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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