CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.14288.1.A1_at

Gene name

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 99.0 Zm.14288.1.A1_at BM348960 - - 1e-37 At1g60780 HAP13 (HAPLESS 13) S.X. H.G.
0.67 85.8 Zm.13266.1.S1_a_at CO534075 hypothetical protein LOC100276122 - 2e+0 At1g79780 - S.X. H.G.
0.60 77.8 Zm.14412.1.S1_a_at BM337383 hypothetical protein LOC100194289 - 4e-15 At4g18100 60S ribosomal protein L32 (RPL32A) S.X. H.G.
0.60 77.8 Zm.15486.2.S1_at AY108982.1 - - 7e-20 At1g71270 POK (POKY POLLEN TUBE) S.X. H.G.
0.60 77.8 Zm.12201.1.A1_at BM379502 plastid ADP-glucose pyrophosphorylase large subunit - 3e-13 At5g19220 APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1) S.X. H.G.
0.50 65.7 RPTR-Zm-M57289-1_s_at RPTR-Zm-M57289-1 - - 0 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.2 96.0 GSM206325 Upper pulvinus 5 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.0 95.8 GSM206291 Upper pulvinus 30 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.0 95.8 GSM206290 Upper pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.0 95.8 GSM206288 Upper pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.0 95.8 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206294 Lower pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206296 Lower pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.9 95.7 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.8 95.5 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-4 46 Zm.17830.1.A1_at CK368104 AP-2 complex subunit mu - 2e-116 At5g46630 clathrin adaptor complexes medium subunit family protein C.G. S.X.
0.01 4e-1 36 Zm.4522.1.S1_at AI734575 hypothetical protein LOC100194076 - 4e-1 At1g56710 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein C.G. S.X.
0.01 4e-1 36 Zm.4083.1.A1_at CA403575 hypothetical protein LOC100191657 - 6e-45 At5g14590 isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative C.G. S.X.
0.01 4e-1 36 Zm.18279.1.S1_at CO519886 hypothetical protein LOC100276929 - 7e-1 At5g06080 LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33) C.G. S.X.
0.01 2e+0 34 ZmAffx.753.1.A1_at AI745901 hypothetical protein LOC100279229 - 8e-1 At3g29633 unknown protein C.G. S.X.
0.01 2e+0 34 ZmAffx.753.1.S1_at AI745901 - - 8e-1 At3g29633 unknown protein C.G. S.X.
0.01 2e+0 34 Zm.4468.1.A1_at AW288919 - - 2e-17 At4g39980 DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1) C.G. S.X.
0.01 2e+0 34 Zm.2220.3.S1_at CA826703 hypothetical protein LOC100273713 - 9e-4 At3g55450 protein kinase, putative C.G. S.X.
0.01 2e+0 34 Zm.17807.1.S1_at CK371584 - - 9e-2 At4g21860 MSRB2 (methionine sulfoxide reductase B 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.43 1e-37 159 Arabidopsis thaliana At1g60780 842372 HAP13 (HAPLESS 13) F:protein binding;P:intracellular protein transport, transport, vesicle-mediated transport;C:clathrin vesicle coat, clathrin adaptor complex;MFOP - - - C.G. S.X.
0.38 5e-34 147 Glycine max Gma.3839.1.S1_a_at CD391787 - - 2e-69 At1g60780 HAP13 (HAPLESS 13) C.G. S.X.
0.60 0 688 Hordeum vulgare Contig4159_at Contig4159 - - 2e-60 At1g60780 HAP13 (HAPLESS 13) C.G. S.X.
0.64 0 866 Oryza sativa Os01g0703600 AK065538.1 - Mu1 adaptin 1e-67 At1g60780 HAP13 (HAPLESS 13) C.G. S.X.
0.17 3e-20 101 Populus trichocarpa Ptp.1758.1.A1_at CV229748 hypothetical protein - 5e-50 At1g60780 HAP13 (HAPLESS 13) C.G. S.X.
0.59 0 739 Triticum aestivum Ta.1235.1.S1_at BQ166015 - - 2e-75 At1g60780 HAP13 (HAPLESS 13) C.G. S.X.
0.29 1e-46 186 Vitis vinifera 1622840_at CF213749 hypothetical protein LOC100251026 - 3e-39 At1g60780 HAP13 (HAPLESS 13) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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