Gene omics information

Query gene ID	Zm.14149.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.14149.1.A1_at	AY111524.1	-	-	1e+0	At5g55135	unknown protein	S.X.	H.G.	Please select
0.77	92.1	Zm.12555.1.A1_x_at	AI673922	-	-	4e+0	At4g28170	unknown protein	S.X.	H.G.	Please select
0.56	74.4	Zm.12345.2.S1_at	AY111982.1	-	-	4e+0	At5g08050	-	S.X.	H.G.	Please select
0.55	71.6	Zm.2922.1.A1_at	CO532813	-	-	9e+0	At4g21865	unknown protein	S.X.	H.G.	Please select
0.55	71.6	Zm.3086.2.A1_a_at	CF633704	alpha-1,4-glucan-protein synthase	-	5e+0	At4g11350	transferase, transferring glycosyl groups	S.X.	H.G.	Please select
0.32	33.4	Zm.5018.3.A1_at	AI668145	-	-	9e-1	At5g48920	TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
7.2	97.8	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.1	97.4	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.9	97.3	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.7	97.2	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.5	97.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.3	96.9	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.1	96.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM202318	B73xMo17 19 day after pollination embryo tissue, biological replicate 2	GSE8179	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
4.9	96.7	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	9e-12	69	ZmAffx.979.1.A1_at	AI833962	UBP26	-	8e-1	At3g15140	exonuclease family protein	C.G.	S.X.	Please select
0.13	9e-12	69	ZmAffx.979.1.S1_at	AI833962	-	-	8e-1	At3g15140	exonuclease family protein	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.10812.1.A1_at	CD976050	-	-	2e-4	At2g28450	zinc finger (CCCH-type) family protein	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.1821.1.A1_at	BG840732	-	-	9e-1	At5g28490	LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)	C.G.	S.X.	Please select
0.03	2e+0	32	Zm.16935.1.S1_at	AY108819.1	hypothetical protein LOC100193218	-	2e+0	At4g22650	-	C.G.	S.X.	Please select
0.01	2e+0	32	Zm.1322.1.A1_at	AI737263	hypothetical protein LOC100279212	-	5e-31	At3g02760	ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding	C.G.	S.X.	Please select
0.02	8e+0	30	Zm.6868.1.A1_a_at	AI065511	transposon protein Pong sub-class	-	1e+0	At5g25560	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	8e+0	30	Zm.5595.1.A1_at	CD442436	hypothetical protein LOC100278654	-	3e-34	At2g29080	ftsh3 (FtsH protease 3)	C.G.	S.X.	Please select
0.02	8e+0	30	Zm.349.1.A1_at	CF060508	hypothetical protein LOC100273805 /// 60S acidic ribosomal protein P1	-	3e-5	At5g47700	60S acidic ribosomal protein P1 (RPP1C)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At5g55135	835606	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	7e+0	32	Glycine max	GmaAffx.33615.1.S1_at	BU925963	-	-	4e+0	At5g28642	unknown protein	C.G.	S.X.	Please select
0.07	4e-5	48	Hordeum vulgare	Contig17459_at	Contig17459	-	-	5e+0	At4g29230	anac075 (Arabidopsis NAC domain containing protein 75)	C.G.	S.X.	Please select
0.02	2e+0	34	Oryza sativa	OsAffx.24866.2.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.204192.1.S1_at	pmrna8253	-	-	9e-1	At2g16060	AHB1 (ARABIDOPSIS HEMOGLOBIN 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	3e-26	119	Triticum aestivum	Ta.15623.1.S1_at	CA485870	-	-	1e+0	At2g41750	DTW domain-containing protein	C.G.	S.X.	Please select
0.03	5e+0	30	Vitis vinifera	1616254_a_at	CF210000	hypothetical protein LOC100261951	-	1e+0	At3g52800	zinc finger (AN1-like) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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