CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.14138.2.A1_at

Gene name hypothetical protein LOC100275347

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 79.5 Zm.14138.2.A1_at CD219182 hypothetical protein LOC100275347 - 3e-9 At1g56423 unknown protein S.X. H.G.
0.73 89.9 Zm.4845.1.S1_x_at CD442886 alcohol dehydrogenase1 /// syntaxin-related protein KNOLLE - 4e-5 At4g03330 SYP123 (SYNTAXIN OF PLANTS 123) S.X. H.G.
0.67 85.8 Zm.4846.1.A1_at BQ538226 cyclin B2 - 3e-7 At1g76310 CYCB2 S.X. H.G.
0.60 77.8 Zm.3780.1.S1_at AW438304 low-molecular-weight cysteine-rich protein LCR69 - 9e-2 At1g47317 - S.X. H.G.
0.59 76.1 Zm.9411.1.S1_at CA827391 SNF1-related protein kinase regulatory subunit beta-2 - 4e-1 At4g26150 CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1) S.X. H.G.
0.53 69.1 Zm.14456.2.S1_a_at CA399302 allyl alcohol dehydrogenase-like protein - 2e-5 At2g36620 RPL24A (ribosomal protein L24) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.3 97.4 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.9 96.7 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
3.9 95.7 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.8 95.5 GSM206318 Lower pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.7 95.4 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206312 Upper pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.5 95.1 GSM206327 Upper pulvinus 30 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.4 94.9 GSM206331 Lower pulvinus 5 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.4 94.9 GSM206321 Lower pulvinus 30 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.4 94.9 GSM206334 Lower pulvinus 60 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.94 0 1905 Zm.14138.2.A1_a_at CD219182 hypothetical protein LOC100275347 - 3e-9 At1g56423 unknown protein C.G. S.X.
0.20 1e-126 452 Zm.14138.1.A1_at U75531.1 hypothetical protein LOC100274046 - 2e-1 At3g21270 ADOF2 C.G. S.X.
0.02 6e-2 38 Zm.4616.2.A1_at CF637845 Hypothetical protein LOC100193318 - 9e-1 At3g25980 mitotic spindle checkpoint protein, putative (MAD2) C.G. S.X.
0.02 1e+0 34 Zm.18388.1.A1_at CB604567 hypothetical protein LOC100273514 - 1e-1 At3g46620 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 4e+0 32 ZmAffx.1429.1.S1_at 11990232-14 - - 0 Atcg00170 - C.G. S.X.
0.02 4e+0 32 ZmAffx.1111.1.A1_at AW231338 - - 8e-1 At4g00560 methionine adenosyltransferase regulatory beta subunit-related C.G. S.X.
0.02 4e+0 32 ZmAffx.1111.1.S1_at AW231338 - - 8e-1 At4g00560 methionine adenosyltransferase regulatory beta subunit-related C.G. S.X.
0.03 4e+0 32 Zm.9565.1.A1_at BM381516 beta-expansin 3 - 6e-1 At4g19270 unknown protein C.G. S.X.
0.02 4e+0 32 Zm.81.1.S1_at AY106090.1 basal endosperm transfer layer1c /// hypothetical protein LOC100279178 - 1e+1 At5g26100 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 3e-9 63 Arabidopsis thaliana At1g56423 6240792 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOPV - - - C.G. S.X.
0.02 8e-1 36 Glycine max Gma.304.1.A1_at AI973719 - - 8e-1 At5g41109 unknown protein C.G. S.X.
0.39 7e-70 264 Hordeum vulgare Contig8596_at Contig8596 - - 1e-8 At1g56423 unknown protein C.G. S.X.
0.45 1e-62 242 Oryza sativa Os03g0307000 9631.m01916 - Hypothetical protein 1e-7 At1g56423 unknown protein C.G. S.X.
0.02 8e-1 36 Populus trichocarpa PtpAffx.25276.1.A1_at CV226111 - - 2e+0 At3g11050 ATFER2 (ferritin 2) C.G. S.X.
0.42 3e-46 186 Triticum aestivum Ta.5711.3.S1_a_at CA608831 - - 5e-7 At1g56423 unknown protein C.G. S.X.
0.13 3e-3 42 Vitis vinifera 1619924_at CB974128 - - 1e-3 At1g56423 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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