Gene omics information

Query gene ID	Zm.14134.1.A1_at
Gene name	CDPK-related protein kinase
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	99.0	Zm.14134.1.A1_at	CK985750	CDPK-related protein kinase	-	1e-18	At3g50530	CRK (CDPK-related kinase)	S.X.	H.G.	Please select
0.56	74.4	Zm.12727.3.S1_a_at	CK394764	hypothetical protein LOC100279085	-	5e-4	At5g07360	amidase family protein	S.X.	H.G.	Please select
0.50	65.7	Zm.24.2.A1_at	AJ001635.1	viviparous1	-	3e+0	At2g40765	unknown protein	S.X.	H.G.	Please select
0.29	28.1	Zm.3762.1.A1_at	AY108773.1	beta-amylase	-	6e+0	At1g26916	unknown protein	S.X.	H.G.	Please select
0.27	24.6	Zm.2849.1.S1_at	CD219229	shaggy-related protein kinase eta	-	4e-52	At1g06390	GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1)	S.X.	H.G.	Please select
0.24	19.8	Zm.13877.1.A1_at	AF099426.1	R2R3MYB-domain protein	-	2e-1	At5g52260	AtMYB19 (myb domain protein 19)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.1	95.9	GSM253262	ZM_4d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.8	95.5	GSM253257	ZM_2d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.6	95.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM253259	ZM_2d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.5	95.1	GSM253256	ZM_2d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.5	95.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM253276	ZM_8d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.3	94.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.2	94.5	GSM253267	ZM_4d_SG200_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.1	94.3	GSM253258	ZM_2d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.73	0	938	Zm.19037.1.S1_at	CA404446	-	-	1e-30	At3g50530	CRK (CDPK-related kinase)	C.G.	S.X.	Please select
0.05	3e-17	89	Zm.41.1.S1_at	AI600908	calcium dependent protein kinase1	-	1e-16	At2g46700	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.09	6e-6	52	Zm.42.1.S1_at	D84508.1	CDPK-related protein kinase	-	9e-17	At2g46700	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.02	2e-5	50	Zm.221.1.A1_at	U28376.1	calcium-dependent protein kinase	-	4e-25	At3g20410	CPK9 (calmodulin-domain protein kinase 9)	C.G.	S.X.	Please select
0.01	6e-3	42	Zm.15857.1.A1_at	D85039.1	calcium-dependent protein kinase	-	2e-36	At1g50700	CPK33	C.G.	S.X.	Please select
0.03	2e-2	40	Zm.6306.1.A1_a_at	AY301062.2	calcium-dependent protein kinase ZmCPK11	-	9e-17	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.03	2e-2	40	Zm.6306.1.A1_at	AY301062.2	calcium-dependent protein kinase ZmCPK11	-	9e-17	At1g35670	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	C.G.	S.X.	Please select
0.01	2e-2	40	Zm.5643.1.A1_at	AY425817.1	mitogen activated protein kinase 6	-	6e-55	At5g19010	MPK16	C.G.	S.X.	Please select
0.06	2e-2	40	Zm.15817.1.S1_x_at	D87044.1	protein kinase catalytic domain	-	1e-4	At4g38230	CPK26	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.17	1e-18	95	Arabidopsis thaliana	At3g50530	824217	CRK (CDPK-related kinase)	CDPK-related kinase	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.20	1e-31	139	Glycine max	GmaAffx.85393.1.S1_at	BI893810	-	-	2e-29	At3g56760	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.26	1e-68	260	Hordeum vulgare	rbags12c10_at	rbags12c10	-	-	2e-2	At3g50530	CRK (CDPK-related kinase)	C.G.	S.X.	Please select
0.54	3e-171	603	Oryza sativa	Os07g0619800	AK121343.1	-	CDPK-related protein kinase (EC 2.7.1.-) (PK421)	8e-48	At3g50530	CRK (CDPK-related kinase)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.14	1e-12	75	Populus trichocarpa	PtpAffx.35223.1.S1_s_at	DN500149	hypothetical protein	-	2e-67	At2g41140	CRK1 (CDPK-RELATED KINASE 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	6e-14	79	Triticum aestivum	Ta.17648.1.S1_at	CA623067	-	-	4e-20	At2g46700	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select
0.03	2e-1	36	Vitis vinifera	1622441_at	CB343305	hypothetical protein LOC100246588	-	2e-30	At3g56760	calcium-dependent protein kinase, putative / CDPK, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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