Gene omics information

Query gene ID	Zm.14120.1.S1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.2	Zm.14120.1.S1_at	AY105834.1	-	-	7e-30	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	S.X.	H.G.	Please select
0.46	58.4	Zm.6929.1.A1_a_at	BG842822	CDPK substrate protein 1	-	3e-5	At5g29000	myb family transcription factor	S.X.	H.G.	Please select
0.40	48.5	Zm.280.1.A1_at	U58208.1	Binding protein homolog1	-	0	At5g42020	BIP2	S.X.	H.G.	Please select
0.21	15.5	Zm.18385.1.S1_at	CO530624	hypothetical protein LOC100276763	-	1e-1	At3g47810	MAG1 (MAIGO 1)	S.X.	H.G.	Please select
0.21	15.5	Zm.4774.1.A1_at	CF637265	hypothetical protein LOC100191958	-	1e+0	At3g26360	unknown protein	S.X.	H.G.	Please select
0.07	2.9	Zm.8846.1.A1_at	BM337343	-	-	4e+0	At3g29250	copper ion binding / oxidoreductase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.0	98.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.6	97.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.4	96.2	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.68	0	2936	Zm.14120.1.A1_at	AY108439.1	-	-	7e-30	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	C.G.	S.X.	Please select
0.04	2e-12	73	Zm.8012.1.A1_at	CA402768	hypothetical protein LOC100216974	-	4e-12	At2g28315	-	C.G.	S.X.	Please select
0.06	6e-10	65	Zm.15320.2.S1_a_at	CF633376	hypothetical protein LOC100276621	-	3e-1	At4g10810	unknown protein	C.G.	S.X.	Please select
0.06	6e-10	65	Zm.15320.2.S1_x_at	CF633376	-	-	3e-1	At4g10810	unknown protein	C.G.	S.X.	Please select
0.03	2e-9	63	ZmAffx.957.1.A1_at	AI833524	-	-	3e+0	At2g40995	-	C.G.	S.X.	Please select
0.03	2e-9	63	ZmAffx.957.1.S1_at	AI833524	-	-	3e+0	At2g40995	-	C.G.	S.X.	Please select
0.05	2e-9	63	Zm.16213.1.S1_at	CF016952	hypothetical protein LOC100216627	-	7e+0	At3g29270	ubiquitin-protein ligase	C.G.	S.X.	Please select
0.04	2e-9	63	Zm.10660.1.A1_at	CF634854	Plasma membrane-bound peroxidase 2b	-	8e-3	At5g05340	peroxidase, putative	C.G.	S.X.	Please select
0.05	3e-8	59	Zm.1639.3.S1_at	BG842159	-	-	5e+0	At4g22920	NYE1 (NON-YELLOWING 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.19	7e-30	133	Arabidopsis thaliana	At1g71220	843462	EBS1 (EMS-mutagenized bri1 suppressor 1)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, UDP-glucose:glycoprotein glucosyltransferase activity;P:carbohydrate biosynthetic process, protein amino acid glycosylation;C:endoplasmic reticulum;MFOBP	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.19	2e-24	115	Glycine max	Gma.6797.1.S1_at	BM177692	-	-	1e-113	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	C.G.	S.X.	Please select
0.19	8e-105	381	Hordeum vulgare	Contig8758_at	Contig8758	-	-	4e-41	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	C.G.	S.X.	Please select
0.66	0	1150	Oryza sativa	Os02g0664200	AK059298.1	-	The start codon is not identified.	1e-77	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.32	2e-49	198	Populus trichocarpa	PtpAffx.202797.1.S1_at	pmrna5552	hypothetical protein	-	3e-90	At1g71220	EBS1 (EMS-mutagenized bri1 suppressor 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	2e-2	42	Triticum aestivum	Ta.17675.1.S1_at	CA623343	-	-	9e+0	At5g43140	peroxisomal membrane 22 kDa family protein	C.G.	S.X.	Please select
0.03	2e-11	69	Vitis vinifera	1609483_at	CF405311	similar to EBS1 (EMS-MUTAGENIZED BRI1 SUPPRESSOR 1); UDP-glucose:glycoprotein glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups	-	1e+0	At3g49620	DIN11 (DARK INDUCIBLE 11)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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