CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.14107.1.S1_at

Gene name peroxin Pex14

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.90 97.0 Zm.14107.1.S1_at CK786818 peroxin Pex14 - 9e-1 At4g22250 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.51 66.4 Zm.8582.1.A1_at BM333994 - - 1e+0 At3g59280 TXR1 (THAXTOMIN A RESISTANT 1) S.X. H.G.
0.48 61.3 Zm.1074.1.A1_at CF631708 - - 1e+0 At1g62940 ACOS5 (ACYL-COA SYNTHETASE 5) S.X. H.G.
0.43 52.8 Zm.5364.1.S1_at CF273142 - - 9e-5 At3g09880 ATB' BETA S.X. H.G.
0.42 51.3 Zm.6139.1.A1_at CA831794 - - 5e+0 At4g01328 unknown protein S.X. H.G.
0.41 49.7 Zm.10745.1.A1_at BQ539349 hypothetical protein LOC100272654 - 4e-3 At4g25990 CIL S.X. H.G.
0.39 45.6 Zm.3169.3.S1_at CF628824 60S ribosomal protein L33-B - 2e-9 At1g74270 60S ribosomal protein L35a (RPL35aC) S.X. H.G.
0.38 44.2 Zm.34.5.A1_at AI734535 - - 4e-2 At2g36950 heavy-metal-associated domain-containing protein S.X. H.G.
0.36 41.3 Zm.5754.1.A1_at CF021134 metallothionein-like protein 1 - 7e-1 At1g07610 MT1C S.X. H.G.
0.35 38.9 Zm.9041.2.A1_at BM335373 hypothetical protein LOC100272775 - 4e-111 At5g47880 ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
6.8 97.6 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
4.9 96.7 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
4.3 96.1 GSM162266 Wild type 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.8 95.5 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
3.8 95.5 GSM206330 Lower pulvinus 2 min polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
3.7 95.4 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
3.5 95.1 GSM385709 Deep-sowing 10d treatment TIBA, biological rep1 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
3.2 94.5 GSM385710 Deep-sowing 10d treatment TIBA, biological rep2 GSE15371 Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing
3.2 94.5 GSM162265 Wild type 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.1 94.3 GSM206312 Upper pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 2e-163 575 Zm.14107.2.A1_at AI770963 - - 8e-1 At3g56880 VQ motif-containing protein C.G. S.X.
0.28 2e-163 575 Zm.14107.2.S1_a_at AI770963 peroxin Pex14 - 8e-1 At3g56880 VQ motif-containing protein C.G. S.X.
0.01 1e-1 38 Zm.665.1.S1_at AF332169.1 alpha expansin1 - 7e-13 At2g37640 EXP3 C.G. S.X.
0.01 1e-1 38 Zm.3174.1.A1_at BM072921 AP-2 complex subunit sigma-1 - 5e-50 At1g47830 clathrin coat assembly protein, putative C.G. S.X.
0.01 1e-1 38 Zm.2634.1.S1_at AW066618 - - 4e+0 At5g48210 unknown protein C.G. S.X.
0.01 1e-1 38 Zm.13740.1.A1_at AW330707 - - 2e-16 At2g29140 APUM3 (Arabidopsis Pumilio 3) C.G. S.X.
0.01 1e-1 38 Zm.13593.1.S1_at AY107755.1 - - 1e-8 At5g60620 phospholipid/glycerol acyltransferase family protein C.G. S.X.
0.01 4e-1 36 Zm.9958.1.A1_at BM333322 - - 6e-2 At3g01320 SNL1 (SIN3-LIKE 1) C.G. S.X.
0.01 4e-1 36 Zm.995.1.A1_at CF040767 - - 2e+0 At5g26080 proline-rich family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 9e-1 36 Arabidopsis thaliana At4g22250 828320 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV - - - C.G. S.X.
0.02 3e-1 38 Glycine max GmaAffx.78321.1.S1_at BM309498 - - 1e+0 At5g62810 PEX14 C.G. S.X.
0.25 1e-35 151 Hordeum vulgare Contig7164_at Contig7164 - - 2e+0 At2g40435 - C.G. S.X.
0.39 8e-43 176 Oryza sativa Os05g0101200 AY262026.1 - Peroxisomal membrane anchor protein (Pex14p)domain containing protein 1e+0 At5g61660 glycine-rich protein C.G. S.X.
0.02 1e+0 36 Populus trichocarpa Ptp.2330.1.S1_at CV241221 hypothetical protein - 2e-18 At1g15200 protein-protein interaction regulator family protein C.G. S.X.
0.36 4e-43 176 Triticum aestivum Ta.9561.2.S1_a_at CK196502 - - 9e-1 At4g19865 kelch repeat-containing F-box family protein C.G. S.X.
0.01 7e-2 38 Vitis vinifera 1615024_at CB911127 hypothetical protein LOC100261826 - 2e-27 At2g05840 PAA2 (20S PROTEASOME SUBUNIT PAA2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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