Gene omics information

Query gene ID	Zm.14075.1.A1_at
Gene name	fiber protein Fb15
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	81.1	Zm.14075.1.A1_at	BG840438	fiber protein Fb15	-	5e-1	Atmg00050	-	S.X.	H.G.	Please select
0.50	65.7	Zm.16892.1.A1_at	CO520304	calmodulin binding protein	-	2e-2	At3g22190	IQD5 (IQ-domain 5)	S.X.	H.G.	Please select
0.44	55.7	Zm.4605.1.A1_at	AI795719	-	-	1e-4	At1g64350	SEH1H	S.X.	H.G.	Please select
0.40	48.5	Zm.15448.1.S1_at	CD448349	plastidic phosphate translocator-like protein1	-	4e-24	At4g32390	phosphate translocator-related	S.X.	H.G.	Please select
0.36	41.3	Zm.4795.2.A1_x_at	AI740164	-	-	2e-1	At4g28703	-	S.X.	H.G.	Please select
0.10	4.6	Zm.16498.1.S1_a_at	AY103577.1	hypothetical protein LOC100193260	-	1e-109	At5g55190	RAN3 (RAN GTPASE 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
2.4	92.2	GSM320438	protocol: mRNA - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.2	91.3	GSM320439	protocol: mRNA - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.0	90.2	GSM258534	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
2.0	90.2	GSM258538	DpDf siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
1.9	89.6	GSM258533	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 2	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
1.8	88.9	GSM258537	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
1.8	88.9	GSM258174	B84 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
1.8	88.9	GSM202408	Zmet2 study 11-day seedling aerial tissue genotype B73 Rep6	GSE8188	Expression profiling of zmet2-m1 mutants relative to wild-type
1.8	88.9	GSM258535	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
1.7	88.2	GSM323172	Zm_SG200Dpep1_24hpi_III	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-2	38	Zm.4830.1.S1_at	CF633606	CHCH domain containing protein	-	9e+0	At5g65600	legume lectin family protein / protein kinase family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.1907.1.S1_at	AW498080	-	-	1e+0	At2g29410	MTPB1 (METAL TOLERANCE PROTEIN B1)	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.18353.1.A1_at	AY111403.1	hypothetical protein LOC100280196	-	2e+0	At1g16640	transcriptional factor B3 family protein	C.G.	S.X.	Please select
0.01	9e-1	34	Zm.6569.5.A1_at	CF637455	-	-	2e-1	At3g01570	glycine-rich protein / oleosin	C.G.	S.X.	Please select
0.01	9e-1	34	Zm.19244.1.S1_at	CO526426	-	-	2e-1	At4g02690	glutamate binding	C.G.	S.X.	Please select
0.01	9e-1	34	Zm.16315.1.S1_a_at	AF326488.1	plasma membrane integral protein ZmPIP1-3	-	3e-24	At3g61430	PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)	C.G.	S.X.	Please select
0.01	9e-1	34	Zm.16315.2.A1_at	AY103580.1	Plasma membrane integral protein ZmPIP1-3	-	6e-14	At1g01620	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)	C.G.	S.X.	Please select
0.01	9e-1	34	Zm.16315.1.S1_x_at	AF326488.1	plasma membrane integral protein ZmPIP1-3	-	3e-24	At3g61430	PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)	C.G.	S.X.	Please select
0.01	4e+0	32	ZmAffx.1215.1.S1_s_at	6273844	-	-	9e-1	At5g64850	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e-1	36	Arabidopsis thaliana	Atmg00050	-	-	hypothetical protein	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e+0	34	Glycine max	GmaAffx.75189.1.A1_at	BE661945	-	-	3e+0	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.19	1e-36	153	Hordeum vulgare	Contig3521_at	Contig3521	-	-	1e-3	At4g30010	unknown protein	C.G.	S.X.	Please select
0.27	4e-40	167	Oryza sativa	Os02g0175800	AK058292.1	-	Conserved hypothetical protein	2e+0	At5g28610	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	3e+0	34	Populus trichocarpa	Ptp.4816.2.S1_at	BU873221	hypothetical protein	-	8e-11	At5g46020	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.51	5e-177	621	Triticum aestivum	Ta.17676.1.S1_a_at	CA623370	-	-	2e+1	At2g03931	-	C.G.	S.X.	Please select
0.05	9e+0	30	Vitis vinifera	1615327_s_at	CB914490	-	-	1e+0	At4g03290	calcium-binding protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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