Gene omics information

Query gene ID	Zm.1404.1.A1_at
Gene name	sugar transport protein 5
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	Zm.1404.1.A1_at	AY108922.1	sugar transport protein 5	-	7e+0	At2g37585	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	S.X.	H.G.	Please select
0.67	85.8	Zm.2263.1.A1_at	AW330859	-	-	7e-5	At2g43050	ATPMEPCRD	S.X.	H.G.	Please select
0.50	65.7	Zm.12848.1.A1_at	AW037142	hypothetical protein LOC100273763	-	5e-1	At1g18780	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.44	55.7	Zm.13797.2.A1_at	AY105820.1	hypothetical protein LOC100279789	-	8e-4	At3g20770	EIN3 (ETHYLENE-INSENSITIVE3)	S.X.	H.G.	Please select
0.35	38.9	Zm.1993.1.S1_at	BQ539120	eyes absent-like protein	-	2e-1	At5g65230	AtMYB53 (myb domain protein 53)	S.X.	H.G.	Please select
0.15	8.6	Zm.5396.1.A1_at	AY112168.1	hypothetical protein LOC100216913	-	8e-5	At1g53645	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select

Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.2	98.0	GSM206305	Right pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.8	97.9	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.2	97.8	GSM206299	Left pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
7.1	97.7	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.5	97.5	GSM206304	Upper pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.8	97.2	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.8	97.2	GSM206327	Upper pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.6	97.1	GSM206331	Lower pulvinus 5 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.1	96.8	GSM206333	Lower pulvinus 30 min polysomal RNA biorep 2	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.8	96.6	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.14	1e-11	69	Zm.13072.1.S1_at	CD438321	hypothetical protein LOC100193044	-	7e+0	At5g12880	proline-rich family protein	C.G.	S.X.	Please select
0.03	7e-4	44	Zm.1324.1.A1_at	AY106711.1	hypothetical protein LOC100274108	-	1e-1	At4g02050	sugar transporter, putative	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.4471.2.S1_at	CA401385	Pyruvate, orthophosphate dikinase1	-	5e-25	At4g15530	PPDK (pyruvate orthophosphate dikinase)	C.G.	S.X.	Please select
0.01	5e-2	38	Zm.4471.2.S1_a_at	CA401385	pyruvate, orthophosphate dikinase1	-	5e-25	At4g15530	PPDK (pyruvate orthophosphate dikinase)	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.7413.1.A1_at	BM078318	lysM domain containing protein	-	1e-1	At1g55000	peptidoglycan-binding LysM domain-containing protein	C.G.	S.X.	Please select
0.01	2e-1	36	Zm.1777.1.A1_at	AY110696.1	hypothetical protein LOC100279457	-	3e-4	At4g21480	carbohydrate transmembrane transporter/ sugar:hydrogen symporter	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.6562.2.A1_a_at	CK347763	plasma membrane associated protein	-	6e+0	At5g56990	-	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.15359.1.S1_at	CO531510	-	-	2e+0	At2g05260	lipase class 3 family protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.4471.1.A1_a_at	J03901.1	pyruvate, orthophosphate dikinase1	-	4e-26	At4g15530	PPDK (pyruvate orthophosphate dikinase)	C.G.	S.X.	Please select

Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e+0	32	Arabidopsis thaliana	At2g37585	818335	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	F:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPOB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e+0	34	Glycine max	GmaAffx.83117.1.S1_at	BQ298145	-	-	3e+0	At2g43110	unknown protein	C.G.	S.X.	Please select
0.22	4e-9	61	Hordeum vulgare	Contig24094_at	Contig24094	-	-	1e+0	At1g19115	unknown protein	C.G.	S.X.	Please select
0.16	2e-94	347	Oryza sativa	Os04g0453400	AK070018.1	-	Sugar transporter family protein	1e-2	At4g21480	carbohydrate transmembrane transporter/ sugar:hydrogen symporter	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	9e+0	32	Populus trichocarpa	PtpAffx.653.19.A1_at	CV259543	hypothetical protein	-	4e-4	At4g32760	protein transporter	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	2e-3	44	Triticum aestivum	TaAffx.37793.1.S1_at	CA648939	-	-	1e+0	At4g30050	unknown protein	C.G.	S.X.	Please select
0.05	8e+0	30	Vitis vinifera	1621687_at	BQ797109	-	-	1e+0	At1g70030	paired amphipathic helix repeat-containing protein	C.G.	S.X.	Please select

Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage