Gene omics information

Query gene ID	Zm.13975.1.A1_at
Gene name	carbonyl reductase 3
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	94.0	Zm.13975.1.A1_at	CK985455	carbonyl reductase 3	-	6e-1	At4g20880	ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)	S.X.	H.G.	Please select
0.83	95.6	Zm.4194.1.A1_at	AI861230	hypothetical protein LOC100276018	-	3e+0	At1g71180	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	S.X.	H.G.	Please select
0.80	94.0	Zm.14617.1.A1_at	BM080453	Hypothetical protein LOC100191188	-	2e+0	At2g33130	RALFL18 (ralf-like 18)	S.X.	H.G.	Please select
0.77	92.1	Zm.4853.1.S1_at	CD439703	-	-	2e-1	At2g45070	SEC61 BETA	S.X.	H.G.	Please select
0.73	89.9	ZmAffx.714.1.S1_at	AI739758	-	-	1e+1	At5g66930	unknown protein	S.X.	H.G.	Please select
0.40	48.5	Zm.12300.1.A1_at	CF626520	ruBisCO large subunit-binding protein subunit alpha	-	1e-37	At2g28000	CPN60A (CHAPERONIN-60ALPHA)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.1	99.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.7	99.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.6	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.0	99.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.6	99.6	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.7	99.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.1	99.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.0	99.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.1	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	1e-80	299	Zm.1741.1.A1_at	AI001352	Hypothetical protein LOC100217183	-	4e-1	At3g17910	SURF1 (SURFEIT 1)	C.G.	S.X.	Please select
0.46	1e-80	299	Zm.1741.1.S1_at	AI001352	hypothetical protein LOC100217183	-	4e-1	At3g17910	SURF1 (SURFEIT 1)	C.G.	S.X.	Please select
0.23	1e-30	133	Zm.9554.1.A1_at	BM267111	hypothetical protein LOC100280419	-	5e+0	At3g53850	-	C.G.	S.X.	Please select
0.23	2e-29	129	Zm.12736.2.A1_at	AI881252	-	-	5e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	C.G.	S.X.	Please select
0.28	2e-29	129	Zm.12736.2.S1_a_at	AI881252	-	-	5e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	C.G.	S.X.	Please select
0.07	2e-8	59	Zm.9126.1.A1_at	BM339245	hypothetical protein LOC100191789	-	2e+0	At5g39800	60S ribosomal protein-related	C.G.	S.X.	Please select
0.03	2e-2	40	Zm.8610.1.A1_at	BM333891	carbonyl reductase 1	-	6e+0	At5g62290	nucleotide-sensitive chloride conductance regulator (ICln) family protein	C.G.	S.X.	Please select
0.02	7e-2	38	Zm.8611.1.A1_at	BM339289	hypothetical protein LOC100276849	-	1e-1	At5g19590	unknown protein	C.G.	S.X.	Please select
0.02	7e-2	38	Zm.8611.2.A1_at	BM340740	rapid alkalinization factor 1	-	2e+0	At2g05600	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-1	36	Arabidopsis thaliana	At4g20880	827836	ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)	F:unknown;P:unknown;C:nucleus;OMFBPVA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-2	42	Glycine max	HgAffx.11532.1.S1_at	CB379728	-	-	5e-3	At4g02075	PIT1 (pitchoun 1)	C.G.	S.X.	Please select
0.47	2e-57	222	Hordeum vulgare	Contig14123_at	Contig14123	-	-	2e-1	At1g01800	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.51	5e-46	186	Oryza sativa	Os04g0532100	AK109281.1	-	Short-chain dehydrogenase/reductase SDR familyprotein	2e-1	At3g59710	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.02	8e-1	36	Populus trichocarpa	PtpAffx.212128.1.S1_x_at	pmrna23787	hypothetical protein	-	1e-1	At2g39445	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.33	2e-53	210	Triticum aestivum	Ta.30531.1.A1_at	CK196859	-	-	2e+0	At3g18470	unknown protein	C.G.	S.X.	Please select
0.02	2e-1	36	Vitis vinifera	1614265_at	CB972256	hypothetical protein LOC100267995	-	4e-4	At3g03520	phosphoesterase family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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