Gene omics information

Query gene ID Zm.13856.1.S1_at
Gene name formate tetrahyrofolate ligase
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.13856.1.S1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)S.X.H.G.
0.6785.8Zm.13853.1.S1_atAF272753.1kinesin heavy chain-1e-14At1g63640kinesin motor protein-relatedS.X.H.G.
0.6785.8Zm.17366.1.S1_s_atCK371241--1e+1At5g20060phospholipase/carboxylesterase family proteinS.X.H.G.
0.5571.6Zm.4304.1.S1_atAI834719--1e-3At3g18600DEAD/DEAH box helicase, putativeS.X.H.G.
0.4658.4Zm.17628.1.S1_atCN845468--6e-17At2g34560katanin, putativeS.X.H.G.
0.4251.3Zm.8865.1.A1_atBM267927hypothetical protein LOC100191271-3e-9At5g35460unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.394.7GSM202402Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep1GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
3.094.0GSM253246ZM_12h_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
2.993.8GSM253265ZM_4d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
2.793.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.692.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.492.2GSM205376B73xMo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
2.492.2GSM253248ZM_12h_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
2.492.2GSM202403Zmet2 study 11-day seedling aerial tissue genotype Mo17 zmet2-m1 Rep1GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
2.391.7GSM253267ZM_4d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
2.391.7GSM205374B73 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001774Zm.13856.1.A1_atAF439727.1formate tetrahyrofolate ligase-9e-58At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)C.G.S.X.
0.022e-136Zm.4622.1.A1_atAI737380--5e-20At1g32900starch synthase, putativeC.G.S.X.
0.013e+032ZmAffx.1436.1.S1_at11990232-2--2e-29Atcg00040-C.G.S.X.
0.023e+032Zm.9144.1.A1_atBM340758copper chaperone for superoxide dismutase-3e-5At1g12520ATCCS (COPPER CHAPERONE FOR SOD1)C.G.S.X.
0.023e+032Zm.5998.1.A1_atAI666110--4e-8At2g03780translin family proteinC.G.S.X.
0.013e+032Zm.3157.1.A1_atAF136826.1Elongation factor 1 alpha-0At1g07930elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.023e+032Zm.18365.1.A1_atCF626505--1e-3At1g13750calcineurin-like phosphoesterase family proteinC.G.S.X.
0.023e+032Zm.17932.1.A1_atAI737365--3e-4At1g73620thaumatin-like protein, putative / pathogenesis-related protein, putativeC.G.S.X.
0.023e+032Zm.17932.1.S1_atAY105492.1--3e-4At1g73620thaumatin-like protein, putative / pathogenesis-related protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.359e-58224Arabidopsis thalianaAt1g50480841470THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)10-formyltetrahydrofolate synthetase (THFS) mRNA, complete---C.G.S.X.
0.367e-50198Glycine maxGmaAffx.54410.1.S1_atBI095119--1e-82At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)C.G.S.X.
0.316e-153539Hordeum vulgareContig233_atContig233--2e-63At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)C.G.S.X.
0.480975Oryza sativaOs09g0446800AK065164.1-Formate-tetrahydrofolate ligase, FTHFS familyprotein1e-62At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)C.G.S.X.
0.229e-31135Populus trichocarpaPtpAffx.13366.1.S1_atAJ76806110-formyltetrahydrofolate synthetase /// 10-formyltetrahydrofolate synthetase-4e-41At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)C.G.S.X.
0.460714Triticum aestivumTa.14577.1.S1_atCA640385--8e-66At1g50480THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE)C.G.S.X.
0.032e+032Vitis vinifera1611094_s_atCF516812hypothetical protein LOC100253655-2e-11At3g56460oxidoreductase, zinc-binding dehydrogenase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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