CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.13832.1.A1_at

Gene name hypothetical protein LOC100194404

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.94 99.5 Zm.13832.1.A1_at AI665313 hypothetical protein LOC100194404 - 3e-9 At5g57330 aldose 1-epimerase family protein S.X. H.G.
0.55 71.6 Zm.14330.1.A1_at AI712010 hypothetical protein LOC100279866 - 9e-10 At1g04850 ubiquitin-associated (UBA)/TS-N domain-containing protein S.X. H.G.
0.45 56.4 Zm.6297.1.A1_at AI691305 - - 1e+1 At5g61412 unknown protein S.X. H.G.
0.39 45.6 Zm.11846.1.A1_at CO526718 SBP-domain protein 7 - 5e+0 At1g72080 unknown protein S.X. H.G.
0.37 42.3 Zm.8972.1.S1_at CD435957 hypothetical protein LOC100217237 - 7e-17 At3g54320 WRI1 (WRINKLED 1) S.X. H.G.
0.33 36.0 Zm.18446.1.A1_at CO518758 - - 3e-2 At1g29800 phosphoinositide binding / zinc ion binding S.X. H.G.
0.33 36.0 Zm.1391.1.A1_at BM079848 hypothetical protein LOC100278100 - 1e-1 At2g14835 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.32 33.4 Zm.94.1.A1_at X79934.1 Dof2 - 1e-7 At2g28810 Dof-type zinc finger domain-containing protein S.X. H.G.
0.31 31.6 Zm.2953.1.S1_at CF054623 hypothetical protein LOC100276099 - 3e-6 At5g13500 unknown protein S.X. H.G.
0.29 28.1 Zm.18416.1.A1_at CO524449 hypothetical protein LOC100193203 - 3e-1 At3g27900 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.5 99.5 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
20.2 99.3 GSM205421 B73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
18.8 99.2 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
16.9 99.1 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
14.0 98.8 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
13.9 98.8 GSM205429 B73xMo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.3 97.4 GSM205374 B73 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
6.2 97.4 GSM320450 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9 97.3 GSM205376 B73xMo17 13 DAP endosperm tissue biological replicate 3 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.8 97.2 GSM205370 B73 13 DAP endosperm tissue biological replicate 2 GSE8275 Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 5e-120 430 Zm.5859.1.S1_at CO521224 apospory-associated protein C - 6e-5 At3g61610 aldose 1-epimerase family protein C.G. S.X.
0.02 7e-2 38 Zm.8528.1.S1_at BM074548 THAP domain-containing protein 4 - 2e+0 At1g79260 unknown protein C.G. S.X.
0.02 3e-1 36 Zm.9567.1.S1_at BM378205 - - 5e-10 At5g10780 - C.G. S.X.
0.01 3e-1 36 Zm.8972.1.S1_at CD435957 hypothetical protein LOC100217237 - 7e-17 At3g54320 WRI1 (WRINKLED 1) C.G. S.X.
0.02 3e-1 36 Zm.7048.1.A1_at AI677399 hypothetical protein LOC100194145 - 6e-7 At4g30996 unknown protein C.G. S.X.
0.01 3e-1 36 Zm.5618.1.S1_at CK827366 ran-binding protein 1 - 7e-10 At5g58590 RANBP1 (RAN BINDING PROTEIN 1) C.G. S.X.
0.01 3e-1 36 Zm.4845.1.S1_at CD442886 alcohol dehydrogenase1 /// syntaxin-related protein KNOLLE - 4e-5 At4g03330 SYP123 (SYNTAXIN OF PLANTS 123) C.G. S.X.
0.01 3e-1 36 Zm.4845.1.S1_x_at CD442886 alcohol dehydrogenase1 /// syntaxin-related protein KNOLLE - 4e-5 At4g03330 SYP123 (SYNTAXIN OF PLANTS 123) C.G. S.X.
0.01 3e-1 36 Zm.19054.1.A1_at CO534445 bile acid sodium symporter/ transporter - 3e+0 At5g03660 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 3e-9 63 Arabidopsis thaliana At5g57330 835838 aldose 1-epimerase family protein F:isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, carbohydrate metabolic process;C:cellular_component unknown;BOPFM - - - C.G. S.X.
0.21 5e-24 113 Glycine max GmaAffx.76678.1.S1_at BE823183 - - 1e-16 At3g61610 aldose 1-epimerase family protein C.G. S.X.
0.47 9e-116 416 Hordeum vulgare Contig9310_at Contig9310 - - 1e-8 At3g61610 aldose 1-epimerase family protein C.G. S.X.
0.52 3e-75 284 Oryza sativa Os01g0658700 AK101948.1 - Aldose 1-epimerase family protein 4e-9 At3g61610 aldose 1-epimerase family protein C.G. S.X.
0.17 3e-19 97 Populus trichocarpa PtpAffx.158005.1.A1_at DN491077 hypothetical protein - 3e-4 At5g57330 aldose 1-epimerase family protein C.G. S.X.
0.09 5e-14 79 Triticum aestivum TaAffx.2938.1.S1_at CA681897 - - 4e+0 At2g15340 glycine-rich protein C.G. S.X.
0.27 3e-34 145 Vitis vinifera 1614552_at CB978862 hypothetical protein LOC100243178 - 3e-30 At3g61610 aldose 1-epimerase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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