Gene omics information

Query gene ID	Zm.13814.1.S1_at
Gene name	hypothetical protein LOC100273186
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	75.1	Zm.13814.1.S1_at	AY104654.1	hypothetical protein LOC100273186	-	1e-5	At1g08940	phosphoglycerate/bisphosphoglycerate mutase family protein	S.X.	H.G.	Please select
0.33	36.0	Zm.18517.1.A1_at	CF630334	-	-	1e+0	At2g42680	MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)	S.X.	H.G.	Please select
0.27	24.6	Zm.3302.1.A1_at	AY110608.1	hypothetical protein LOC100276576	-	5e-1	At5g04150	BHLH101	S.X.	H.G.	Please select
0.27	24.6	Zm.6331.1.S1_at	CO523745	-	-	6e-118	At1g70490	ARFA1D	S.X.	H.G.	Please select
0.14	7.7	Zm.990.1.A1_at	CF636054	-	-	1e+1	At5g44345	F-box family protein-related	S.X.	H.G.	Please select
0.03	1.1	Zm.3497.1.A1_at	CF021745	hypothetical protein LOC100272844	-	7e-31	At4g31870	ATGPX7 (glutathione peroxidase 7)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
8.6	98.1	GSM162264	Mutant 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.1	97.7	GSM206309	Lower pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.2	97.4	GSM206308	Lower pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
6.2	97.4	GSM206303	Upper pulvinus 30 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.5	97.1	GSM206297	Lower pulvinus 30 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
5.3	96.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM206302	Upper pulvinus 15 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.7	96.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	8e-2	38	Zm.4416.1.S1_at	AY536525.1	phospholipase C	-	5e-3	At5g58700	phosphoinositide-specific phospholipase C family protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.8160.1.A1_at	BM337443	hypothetical protein LOC100274775	-	2e-2	At3g09032	unknown protein	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.7274.1.S1_at	BI233786	-	-	1e+0	At4g19630	heat shock factor protein-related / heat shock transcription factor-related	C.G.	S.X.	Please select
0.01	3e-1	36	Zm.14426.1.S1_at	AY106464.1	-	-	8e-3	At3g54200	-	C.G.	S.X.	Please select
0.02	3e-1	36	Zm.12649.1.A1_at	CF007744	F-box domain containing protein	-	8e-1	At5g26070	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.02	1e+0	34	ZmAffx.59.1.A1_at	AI665091	-	-	1e+1	At5g53960	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	C.G.	S.X.	Please select
0.02	1e+0	34	ZmAffx.59.1.S1_at	AI665091	-	-	1e+1	At5g53960	ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)	C.G.	S.X.	Please select
0.02	1e+0	34	ZmAffx.1199.1.A1_at	BE057023	-	-	5e-2	At3g48610	phosphoesterase family protein	C.G.	S.X.	Please select
0.02	1e+0	34	ZmAffx.1199.1.S1_at	BE057023	-	-	5e-2	At3g48610	phosphoesterase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	1e-5	52	Arabidopsis thaliana	At1g08940	837415	phosphoglycerate/bisphosphoglycerate mutase family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;BFOPAM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	38	Glycine max	PsAffx.C53000010_at	PsAffx.C53000010	-	-	2e+0	At2g33830	dormancy/auxin associated family protein	C.G.	S.X.	Please select
0.07	5e-28	125	Hordeum vulgare	Contig13189_at	Contig13189	-	-	7e-5	At5g67640	unknown protein	C.G.	S.X.	Please select
0.52	0	751	Oryza sativa	Os05g0141700	AK065644.1	-	Phosphoglycerate/bisphosphoglycerate mutase familyprotein	4e-8	At3g05170	phosphoglycerate/bisphosphoglycerate mutase family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	7e-5	50	Populus trichocarpa	PtpAffx.222762.1.S1_at	pmrna40401	hypothetical protein	-	4e-7	At3g05170	phosphoglycerate/bisphosphoglycerate mutase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	4e-52	206	Triticum aestivum	Ta.25476.1.S1_at	CD454009	-	-	4e-4	At5g67640	unknown protein	C.G.	S.X.	Please select
0.03	1e-3	44	Vitis vinifera	1618989_at	BM437572	hypothetical protein LOC100258700	-	1e+0	At1g67785	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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