Gene omics information

Query gene ID Zm.13808.2.A1_a_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.6Zm.13808.2.A1_a_atAI665043--4e-7At4g03240FH (FRATAXIN HOMOLOG)S.X.H.G.
0.7792.1Zm.5548.2.A1_atCD4359642,3-bisphosphoglycerate-independent phosphoglycerate mutase-2e-60At1g097802,3-biphosphoglycerate-independent phosphoglycerate mutase, putative / phosphoglyceromutase, putativeS.X.H.G.
0.6785.8Zm.13808.2.A1_atAI665043--4e-7At4g03240FH (FRATAXIN HOMOLOG)S.X.H.G.
0.4352.8Zm.5715.1.A2_atBI542710O-methyltransferase ZRP4-3e+0At5g25752RBL11 (RHOMBOID-LIKE PROTEIN 11)S.X.H.G.
0.4048.5Zm.11240.1.A1_atBM340894--1e+0At3g5954060S ribosomal protein L38 (RPL38B)S.X.H.G.
0.2521.3Zm.9411.1.S1_atCA827391SNF1-related protein kinase regulatory subunit beta-2-4e-1At4g26150CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.999.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.299.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
29.399.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.399.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.599.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.899.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.499.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.399.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.198.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.897.2GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.0001279Zm.13808.2.A1_atAI665043--4e-7At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
1.0001279Zm.13808.2.S1_atCF631727hypothetical protein LOC100279847-4e-7At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.415e-177619Zm.13808.1.A1_atCD976072--6e-4At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.415e-177619Zm.13808.1.S1_a_atAY104740.1hypothetical protein LOC100279847-6e-4At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.415e-177619Zm.13808.1.S1_atAY104740.1hypothetical protein LOC100279847-6e-4At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.041e-136ZmAffx.982.4.A1_atAW787457--3e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)C.G.S.X.
0.041e-136ZmAffx.982.4.S1_atAW787457--3e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)C.G.S.X.
0.011e-136ZmAffx.1214.1.S1_s_at13397940hypothetical protein LOC100192494 /// hypothetical protein LOC100275739-7e-3At2g01021unknown proteinC.G.S.X.
0.036e-134Zm.9415.2.A1_atBM348481--7e-2At5g01075beta-galactosidaseC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.094e-756Arabidopsis thalianaAt4g03240828013FH (FRATAXIN HOMOLOG)Encodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress.---C.G.S.X.
0.093e-859Glycine maxGma.14629.1.A1_atCD407488--2e-5At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.042e-136Hordeum vulgareHVSMEc0009D21r2_atHVSMEc0009D21r2--1e-3At2g04900unknown proteinC.G.S.X.
0.321e-66254Oryza sativaOs.40269.1.S1_at---0C.G.S.X.
0.052e-654Populus trichocarpaPtp.4456.1.S1_atCV243734hypothetical protein-5e-19At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.585e-173607Triticum aestivumTaAffx.112170.1.S1_atCA626440--3e-7At4g03240FH (FRATAXIN HOMOLOG)C.G.S.X.
0.032e+032Vitis vinifera1606609_atCF415334hypothetical protein LOC100262065-3e-7At1g30550-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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