Gene omics information

Query gene ID Zm.13740.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.13740.1.A1_atAW330707--2e-16At2g29140APUM3 (Arabidopsis Pumilio 3)S.X.H.G.
0.5469.8Zm.11196.1.A1_atBM379862hypothetical protein LOC100275201-1e+0At5g64160unknown proteinS.X.H.G.
0.5369.1Zm.11943.1.S1_atCO523092dihydroflavonol-4-reductase-7e-4At5g42800DFR (DIHYDROFLAVONOL 4-REDUCTASE)S.X.H.G.
0.5369.1Zm.6339.1.A1_atAI691450--3e-1At5g11930glutaredoxin family proteinS.X.H.G.
0.5166.4ZmAffx.1046.1.A1_atAI881792--8e-1At1g79160unknown proteinS.X.H.G.
0.4861.3Zm.15817.1.A1_atD87044.1protein kinase catalytic domain-3e-8At5g04870CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1)S.X.H.G.
0.4759.9Zm.8632.1.A1_atBM268513--5e+0At3g55672-S.X.H.G.
0.4759.9ZmAffx.201.1.S1_atAI670148--3e+0At2g27740unknown proteinS.X.H.G.
0.4759.9Zm.1581.1.S1_atAW566202--1e+1At3g43153cAMP-dependent protein kinase inhibitor-relatedS.X.H.G.
0.4455.7Zm.3169.5.S1_a_atAI739763hypothetical protein LOC100279753 /// minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.696.4GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydis
4.596.3GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
4.396.1GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.895.5GSM206330Lower pulvinus 2 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.895.5GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.895.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.695.2GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
3.294.5GSM206306Lower pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.194.3GSM206324Upper pulvinus 2 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
3.194.3GSM206300Upper pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-1375Zm.3174.1.A1_atBM072921AP-2 complex subunit sigma-1-5e-50At1g47830clathrin coat assembly protein, putativeC.G.S.X.
0.063e-1375Zm.2825.2.A1_atAY103788.1--1e-9At2g29140APUM3 (Arabidopsis Pumilio 3)C.G.S.X.
0.034e-1271Zm.995.1.A1_atCF040767--2e+0At5g26080proline-rich family proteinC.G.S.X.
0.024e-1271Zm.7297.1.S1_atT18738--2e-48At5g50920CLPC1C.G.S.X.
0.034e-1271Zm.4613.1.A1_atCK826972--5e-1At1g73770unknown proteinC.G.S.X.
0.034e-1271Zm.18100.1.S1_atAI967288--8e-4At5g04740ACT domain-containing proteinC.G.S.X.
0.034e-1271Zm.18100.1.S1_a_atAI967288--8e-4At5g04740ACT domain-containing proteinC.G.S.X.
0.044e-1271Zm.13765.1.S1_atAY105680.1hypothetical protein LOC100191482-3e-1At4g23910unknown proteinC.G.S.X.
0.044e-1271Zm.12882.1.S1_atCD442601hypothetical protein LOC100277163-4e-1At1g29179-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-1687Arabidopsis thalianaAt2g29140817463APUM3 (Arabidopsis Pumilio 3)F:RNA binding, binding;P:unknown;C:plasma membrane;FOMPB---C.G.S.X.
0.172e-1171Glycine maxGma.16338.1.S1_atBI968705--6e-31At2g29190APUM2 (Arabidopsis Pumilio 2)C.G.S.X.
0.215e-52204Hordeum vulgareContig24225_atContig24225--2e-12At3g10360APUM4 (Arabidopsis Pumilio 4)C.G.S.X.
0.342e-73278Oryza sativaOs02g0819300CB671807-ARM repeat fold domain containing protein1e-7At2g29140APUM3 (Arabidopsis Pumilio 3)C.G.S.X.
0.111e-861Populus trichocarpaPtpAffx.207623.1.S1_atpmrna15115hypothetical protein-1e-41At3g10360APUM4 (Arabidopsis Pumilio 4)C.G.S.X.
0.403e-123442Triticum aestivumTaAffx.48100.1.S1_atCA603041--1e-14At3g10360APUM4 (Arabidopsis Pumilio 4)C.G.S.X.
0.219e-25113Vitis vinifera1616446_atCB978171hypothetical protein LOC100265064-3e-67At2g29140APUM3 (Arabidopsis Pumilio 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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