CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.13737.2.S1_at

Gene name hypothetical protein LOC100272721

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 71.6 Zm.13737.2.S1_at AI065573 hypothetical protein LOC100272721 - 6e-54 At4g08900 arginase S.X. H.G.
0.60 77.8 ZmAffx.1.1.S1_s_at AY722707.1 hypothetical LOC542518 - 5e-51 At1g57870 ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42) S.X. H.G.
0.50 65.7 Zm.14036.1.S1_at X55388.1 embryo specific protein1 - 3e-2 At2g40170 GEA6 (LATE EMBRYOGENESIS ABUNDANT 6) S.X. H.G.
0.40 48.5 Zm.13033.1.A1_at AY108193.1 - - 4e-2 At5g47700 60S acidic ribosomal protein P1 (RPP1C) S.X. H.G.
0.40 48.5 Zm.6977.5.A1_at AI881652 Sucrose synthase - 1e-11 At5g20830 SUS1 (SUCROSE SYNTHASE 1) S.X. H.G.
0.23 18.6 Zm.5451.1.S1_at AI621979 - - 8e-4 At4g36970 remorin family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.3 98.9 GSM162264 Mutant 2 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.5 97.8 GSM205424 Mo17 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.3 97.8 GSM162267 Mutant 1 with array type maize from Affymetrix GSE7030 Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.1 97.7 GSM205431 Mo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.9 97.7 GSM205423 B73xMo17 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.6 97.6 GSM205433 B73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.5 97.5 GSM205422 Mo17xB73 19 DAP endosperm tissue biological replicate 1 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.2 97.4 GSM205436 B73xMo17 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.2 97.4 GSM205434 Mo17xB73 19 DAP endosperm tissue biological replicate 3 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
6.0 97.3 GSM205425 B73 19 DAP endosperm tissue biological replicate 2 GSE8278 Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 9e-2 38 Zm.7.1.S1_at AW787278 glyceraldehyde-3-phosphate dehydrogenase1 - 3e-9 At1g12900 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) C.G. S.X.
0.01 4e-1 36 Zm.4824.1.A1_x_at CD446403 hypothetical protein LOC100273118 - 5e-23 At3g04840 40S ribosomal protein S3A (RPS3aA) C.G. S.X.
0.01 1e+0 34 Zm.534.2.S1_at AI692057 FLP1 - 2e-4 At5g10625 - C.G. S.X.
0.02 1e+0 34 Zm.1537.1.A1_at BG841996 - - 2e+1 Atmg00940 - C.G. S.X.
0.01 1e+0 34 Zm.14596.1.S1_a_at CD441249 60S ribosomal protein L10-3 - 6e-47 At1g14320 SAC52 (SUPPRESSOR OF ACAULIS 52) C.G. S.X.
0.01 1e+0 34 Zm.14596.1.S1_at CD441249 QM protein - 6e-47 At1g14320 SAC52 (SUPPRESSOR OF ACAULIS 52) C.G. S.X.
0.01 6e+0 32 Zm.9213.1.A1_at BM267362 hypothetical protein LOC100278667 - 5e+0 At5g45590 unknown protein C.G. S.X.
0.01 6e+0 32 Zm.6115.1.A1_at CB351082 prefoldin subunit 1 - 4e-1 At4g23070 ATRBL7 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 7) C.G. S.X.
0.01 6e+0 32 Zm.4878.1.A1_at AW288995 hsc70-interacting protein - 6e-8 At4g22670 AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 6e-54 212 Arabidopsis thaliana At4g08900 826468 arginase Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen. - - - C.G. S.X.
0.16 2e-23 111 Glycine max GmaAffx.92209.1.S1_at CF807934 - - 2e-29 At4g08900 arginase C.G. S.X.
0.57 0 995 Hordeum vulgare Contig5654_at Contig5654 - - 9e-59 At4g08900 arginase C.G. S.X.
0.55 0 969 Oryza sativa Os04g0106300 AK101488.1 - Arginase (EC 3.5.3.1) 2e-35 At4g08900 arginase C.G. S.X.
0.30 1e-43 178 Populus trichocarpa PtpAffx.87993.1.S1_a_at CV255326 hypothetical protein - 2e-90 At4g08900 arginase C.G. S.X.
0.55 0 938 Triticum aestivum Ta.25547.1.S1_at BQ246620 - - 5e-51 At4g08900 arginase C.G. S.X.
0.22 2e-35 149 Vitis vinifera 1620747_at CF210152 hypothetical protein LOC100245397 - 3e-29 At4g08900 arginase C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage