CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.13648.1.S1_at

Gene name caleosin related protein

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 65.7 Zm.13648.1.S1_at AY107241.1 caleosin related protein - 2e+0 At1g70670 caleosin-related family protein S.X. H.G.
0.55 71.6 Zm.12674.1.A1_at CN845329 - - 5e-5 At1g34350 unknown protein S.X. H.G.
0.53 69.1 Zm.18374.1.A1_at CO521737 hypothetical protein LOC100191144 - 1e-1 At1g21890 nodulin MtN21 family protein S.X. H.G.
0.50 65.7 Zm.12433.1.S1_at AY105016.1 tyrosyl-tRNA synthetase - 4e-18 At2g33840 tRNA synthetase class I (W and Y) family protein S.X. H.G.
0.46 58.4 Zm.5180.1.A1_at AI612313 - - 1e+1 At5g27090 AGL54 S.X. H.G.
0.44 55.7 Zm.10098.1.A1_at CO531187 hypothetical protein LOC100272958 - 2e-2 At2g44060 late embryogenesis abundant family protein / LEA family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.3 99.5 GSM253281 ZM_8d_SG200_3Alu_II GSE10023 Maize gene expression during infection with Ustilago maydis
10.9 98.5 GSM253282 ZM_8d_SG200_3Alu_III GSE10023 Maize gene expression during infection with Ustilago maydis
10.3 98.4 GSM253280 ZM_8d_SG200_3Alu_I GSE10023 Maize gene expression during infection with Ustilago maydis
7.0 97.7 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.4 97.0 GSM206329 Right pulvinus control polysomal RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.1 96.8 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.8 96.6 GSM253278 ZM_8d_SG200_3inf_II GSE10023 Maize gene expression during infection with Ustilago maydis
4.6 96.4 GSM206311 Left pulvinus control total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.5 96.3 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
4.3 96.1 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 2e-11 69 Zm.12309.1.S1_at CA403435 ABA-induced protein - 5e-1 At5g29560 calcium ion binding C.G. S.X.
0.03 1e-6 54 Zm.3938.1.A1_at CB350990 - - 2e+0 At5g63310 NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2) C.G. S.X.
0.03 6e-5 48 Zm.10480.1.S1_at BM332553 polcalcin Jun o 2 - 2e+0 At4g08230 glycine-rich protein C.G. S.X.
0.02 1e-2 40 Zm.9197.2.A1_at CF637986 - - 2e+0 At5g44460 calcium-binding protein, putative C.G. S.X.
0.03 6e-2 38 Zm.11997.1.A1_at BM382529 - - 4e+0 At5g67010 AP2 domain-containing transcription factor, putative C.G. S.X.
0.03 6e-2 38 Zm.10267.1.A1_at BM660593 - - 8e-2 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.01 2e-1 36 Zm.3902.1.A1_at AW062054 - - 1e+0 At5g55570 unknown protein C.G. S.X.
0.01 2e-1 36 Zm.3902.1.S1_at AY106289.1 - - 1e+0 At5g55570 unknown protein C.G. S.X.
0.02 2e-1 36 Zm.11848.1.A1_at CF631118 calmodulin - 3e-1 At1g73630 calcium-binding protein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At1g70670 843404 caleosin-related family protein F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO - - - C.G. S.X.
0.03 3e-3 44 Glycine max PsAffx.psZS009xF16f_at PsAffx.psZS009xF16f - - 5e+0 At5g53180 PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2) C.G. S.X.
0.27 5e-24 111 Hordeum vulgare Contig4442_at Contig4442 - - 2e+0 At4g05030 heavy-metal-associated domain-containing protein C.G. S.X.
0.17 2e-20 101 Oryza sativa Os02g0734600 AK070347.1 - EFA27 for EF hand, abscisic acid, 27kD 8e-1 At4g14640 CAM8 (CALMODULIN 8) C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.114663.1.A1_at CV249914 - - 1e-3 At1g08390 nucleic acid binding C.G. S.X.
0.24 4e-17 89 Triticum aestivum Ta.9155.1.S1_x_at BQ238617 - - 2e+0 At4g05030 heavy-metal-associated domain-containing protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1616571_at CF205416.1 - - 1e+0 At5g39645 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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