Gene omics information

Query gene ID	Zm.1364.1.A1_at
Gene name	structural constituent of ribosome
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.60	77.8	Zm.1364.1.A1_at	AW927470	structural constituent of ribosome	-	6e-3	At5g27820	ribosomal protein L18 family protein	S.X.	H.G.	Please select
0.80	94.0	Zm.13076.1.A1_at	BQ703993	-	-	2e+0	At1g07350	transformer serine/arginine-rich ribonucleoprotein, putative	S.X.	H.G.	Please select
0.71	88.2	Zm.2454.1.A1_at	AW216305	DNA-binding protein	-	3e-4	At4g25320	DNA-binding protein-related	S.X.	H.G.	Please select
0.63	81.1	Zm.15678.1.A1_at	CD440195	hypothetical protein LOC100192926	-	7e+0	At4g18280	glycine-rich cell wall protein-related	S.X.	H.G.	Please select
0.57	75.1	Zm.6964.1.S1_at	AI665995	-	-	6e-2	At4g22320	unknown protein	S.X.	H.G.	Please select
0.50	65.7	Zm.13595.1.A1_at	AY107750.1	phosphatase phospho1	-	2e-6	At1g73010	phosphatase	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
10.9	98.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.4	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.5	97.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.9	93.8	GSM205433	B73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.23	2e-25	115	Zm.15405.1.A1_at	CF628994	50S ribosomal protein L18 /// 50S ribosomal protein L18	-	2e-6	At5g27820	ribosomal protein L18 family protein	C.G.	S.X.	Please select
0.02	2e-1	36	Zm.18035.1.A1_at	CK985665	hypothetical protein LOC100279473	-	7e+0	At4g23271	unknown protein	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.2497.1.S1_at	AY107480.1	hypothetical protein LOC100272917	-	3e-55	At4g12400	stress-inducible protein, putative	C.G.	S.X.	Please select
0.02	6e-1	34	Zm.12993.1.A1_at	CF632679	hypothetical protein LOC100273862	-	3e-2	At3g04380	SUVR4	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.6882.2.A1_at	BG837779	hypothetical protein LOC100191938	-	4e-2	At1g01100	60S acidic ribosomal protein P1 (RPP1A)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.5679.1.S1_at	CD437138	hypothetical protein LOC100216885	-	3e-3	At2g43950	OEP37	C.G.	S.X.	Please select
0.03	3e+0	32	Zm.348.3.S1_at	AI677540	Acidic ribosomal protein P3	-	2e-1	At1g15800	unknown protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.348.1.A1_x_at	U62751.1	acidic ribosomal protein P3	-	1e-1	At1g64620	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.348.2.A1_a_at	CK347453	acidic ribosomal protein P3	-	9e-2	At1g64620	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	6e-3	42	Arabidopsis thaliana	At5g27820	832844	ribosomal protein L18 family protein	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:ribosome, intracellular;BOPM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e-4	46	Glycine max	Gma.9850.1.S1_at	AW311448	-	-	5e-6	At5g27820	ribosomal protein L18 family protein	C.G.	S.X.	Please select
0.30	6e-17	87	Hordeum vulgare	Contig12294_at	Contig12294	-	-	3e-14	At5g27820	ribosomal protein L18 family protein	C.G.	S.X.	Please select
0.17	7e-72	272	Oryza sativa	Os03g0694800	AK071362.1	-	Ribosomal protein L18P/L5E family protein	1e+0	At3g50360	ATCEN2 (CENTRIN2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	3e-5	50	Populus trichocarpa	Ptp.4697.2.A1_a_at	CV277595	-	-	8e-6	At5g27820	ribosomal protein L18 family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	5e-19	95	Triticum aestivum	Ta.11320.2.S1_at	CA611508	-	-	5e-12	At5g27820	ribosomal protein L18 family protein	C.G.	S.X.	Please select
0.05	3e-2	38	Vitis vinifera	1619774_at	CD800274	hypothetical protein LOC100251051	-	4e-7	At5g27820	ribosomal protein L18 family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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