Gene omics information

Query gene ID	Zm.1360.1.S1_at
Gene name	hypothetical protein LOC100276510
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.37	42.3	Zm.1360.1.S1_at	AW927383	hypothetical protein LOC100276510	-	6e-1	At4g27890	nuclear movement family protein	S.X.	H.G.	Please select
0.55	71.6	ZmAffx.957.1.S1_at	AI833524	-	-	3e+0	At2g40995	-	S.X.	H.G.	Please select
0.53	69.1	Zm.9852.1.A1_at	BM381073	syntaxin 121	-	5e-3	At5g63740	zinc finger protein-related	S.X.	H.G.	Please select
0.50	65.7	Zm.6304.1.A1_a_at	AI714476	dnaJ domain containing protein	-	3e-1	At1g28160	ethylene-responsive element-binding family protein	S.X.	H.G.	Please select
0.43	52.8	Zm.4775.1.A1_at	CK826898	-	-	1e-1	At2g36695	unknown protein	S.X.	H.G.	Please select
0.29	28.1	Zm.6423.2.A1_at	AI691968	hypothetical protein LOC100273356	-	1e+0	At3g23180	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
42.1	99.9	GSM258201	Wf9 11-day seedling aerial tissue biological replicate 1	GSE10237	Gene expression variation among eight maize inbreds
33.5	99.9	GSM258207	Wf9 11-day seedling aerial tissue biological replicate 3	GSE10237	Gene expression variation among eight maize inbreds
30.7	99.8	GSM258204	Wf9 11-day seedling aerial tissue biological replicate 2	GSE10237	Gene expression variation among eight maize inbreds
26.6	99.7	GSM258172	B37 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
22.6	99.5	GSM258181	B37 11-day seedling aerial tissue biological replicate 2	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
14.7	98.9	GSM258174	B84 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
14.2	98.8	GSM258190	B37 11-day seedling aerial tissue biological replicate 3	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
13.7	98.8	GSM258183	B84 11-day seedling aerial tissue biological replicate 2	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
10.6	98.4	GSM258192	B84 11-day seedling aerial tissue biological replicate 3	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis
8.2	98.0	GSM258178	B84xB73 11-day seedling aerial tissue biological replicate 1	GSE10236	Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.75	8e-125	444	Zm.1360.1.S1_x_at	AW927383	hypothetical protein LOC100276510	-	6e-1	At4g27890	nuclear movement family protein	C.G.	S.X.	Please select
0.52	2e-76	284	Zm.13844.1.A1_at	AY104009.1	hypothetical protein LOC100276510	-	4e+0	At4g27890	nuclear movement family protein	C.G.	S.X.	Please select
0.23	5e-12	69	Zm.1937.1.S1_at	CN845484	hypothetical protein LOC100277662	-	5e+0	At3g50800	unknown protein	C.G.	S.X.	Please select
0.01	1e+0	32	Zm.4074.1.S1_at	CD568857	myristoyl-acyl carrier protein thioesterase	-	7e-8	At1g08510	FATB (fatty acyl-ACP thioesterases B)	C.G.	S.X.	Please select
0.01	4e+0	30	Zm.3261.1.A1_at	AY104216.1	hypothetical protein LOC100274106	-	2e-57	At4g24830	arginosuccinate synthase family	C.G.	S.X.	Please select
0.02	4e+0	30	Zm.16849.1.S1_at	AY105649.1	circumsporozoite protein	-	7e+0	At5g07840	ankyrin repeat family protein	C.G.	S.X.	Please select
0.04	4e+0	30	Zm.15779.1.A1_at	CD484306	-	-	7e-2	At3g14670	unknown protein	C.G.	S.X.	Please select
0.06	2e+1	28	ZmAffx.150.1.A1_at	AI667840	hypothetical protein LOC100193164	-	1e+1	At5g52605	-	C.G.	S.X.	Please select
0.06	2e+1	28	ZmAffx.150.1.S1_at	AI667840	Hypothetical protein LOC100193164	-	1e+1	At5g52605	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e-1	34	Arabidopsis thaliana	At4g27890	828902	nuclear movement family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	3e+0	32	Glycine max	Gma.10421.2.S1_at	BG042007	-	-	1e-20	At5g63870	PP7 (SERINE/THREONINE PHOSPHATASE 7)	C.G.	S.X.	Please select
0.03	3e-1	34	Hordeum vulgare	Contig24755_at	Contig24755	-	-	2e-6	At4g33060	peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein	C.G.	S.X.	Please select
0.06	1e-3	44	Oryza sativa	Os.50326.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e+0	32	Populus trichocarpa	PtpAffx.80156.1.S1_at	DN488849	-	-	3e-1	At3g14160	oxidoreductase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+1	30	Triticum aestivum	TaAffx.81223.1.S1_at	CA688391	-	-	1e-2	At2g47060	serine/threonine protein kinase, putative	C.G.	S.X.	Please select
0.03	1e+1	28	Vitis vinifera	1618642_at	CF604519	hypothetical protein LOC100265629	-	5e-13	At5g51410	LUC7 N_terminus domain-containing protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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