Gene omics information

Query gene ID Zm.13588.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5976.1Zm.13588.1.A1_atAY107800.1--1e+0At4g3467040S ribosomal protein S3A (RPS3aB)S.X.H.G.
0.3641.3Zm.9940.1.A1_atBM339055--3e-2At5g26860LON1 (LON PROTEASE 1)S.X.H.G.
0.3641.3Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.3538.9Zm.8311.2.A1_a_atBM073622--4e+0At4g23090unknown proteinS.X.H.G.
0.3233.4Zm.13940.1.S1_atAI677337hypothetical protein LOC100193246-1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)S.X.H.G.
0.2622.7Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.398.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.898.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.698.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.398.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.798.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.098.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.898.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.898.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.098.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.897.2GSM258535Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3GSE10243Profiling expression changes caused by a segmental aneuploid in maize
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.630700Zm.13588.1.S1_atCD568500--1e+0At4g3467040S ribosomal protein S3A (RPS3aB)C.G.S.X.
0.025e-134Zm.12876.1.S1_atCF63210324-methylenesterol C-methyltransferase 2-8e+0At3g62970protein binding / zinc ion bindingC.G.S.X.
0.032e+032ZmAffx.690.1.A1_atAI737303--1e+1At5g64040PSANC.G.S.X.
0.032e+032ZmAffx.690.1.S1_atAI737303--1e+1At5g64040PSANC.G.S.X.
0.032e+032Zm.7905.1.S1_atBM078113hypothetical protein LOC100193292-6e-15At1g09340CRB (CHLOROPLAST RNA BINDING)C.G.S.X.
0.022e+032Zm.6595.2.A1_atAY105532.1Hypothetical protein LOC100191605-1e-4At1g25375metallo-beta-lactamase family proteinC.G.S.X.
0.022e+032Zm.6595.2.S1_atAY105532.1hypothetical protein LOC100191605-1e-4At1g25375metallo-beta-lactamase family proteinC.G.S.X.
0.022e+032Zm.52.1.A1_atAB021175.1root cap protein 1-2e+0At5g60520late embryogenesis abundant protein-related / LEA protein-relatedC.G.S.X.
0.012e+032Zm.4437.1.S1_atCO522989cuc3 protein-2e-1At1g76420CUC3 (CUP SHAPED COTYLEDON3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt4g3467082961940S ribosomal protein S3A (RPS3aB)F:structural constituent of ribosome;P:translation;C:in 6 components;MOAPFB---C.G.S.X.
0.046e+032Glycine maxPsAffx.psML001xF02f_s_atPsAffx.psML001xF02f--3e+0At1g70680caleosin-related family proteinC.G.S.X.
0.035e-134Hordeum vulgareContig13690_atContig13690--3e-2At5g28610-C.G.S.X.
0.166e-1375Oryza sativaOsAffx.30579.1.S1_x_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.211448.1.S1_atpmrna22436hypothetical protein-4e+0At3g56910PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)C.G.S.X.
0.041e+034Triticum aestivumTaAffx.86084.1.S1_atCA616878--3e+0At5g42635glycine-rich proteinC.G.S.X.
0.035e+030Vitis vinifera1613845_atBQ796489hypothetical protein LOC100253787-3e+0At5g01712CPuORF48 (Conserved peptide upstream open reading frame 48)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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