Gene omics information

Query gene ID Zm.13523.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.13523.1.A1_atAY108425.1--6e-1At5g59470PQ-loop repeat family protein / transmembrane family proteinS.X.H.G.
0.8094.0Zm.19299.1.A1_atBM074654--4e-3At4g09270unknown proteinS.X.H.G.
0.7389.9Zm.18525.1.A1_atCO530497--1e-4At5g28150unknown proteinS.X.H.G.
0.6785.8Zm.13494.1.A1_atAY108782.1--4e-1At2g17300unknown proteinS.X.H.G.
0.5065.7Zm.5989.1.A1_atAI666066--3e-1At4g24960ATHVA22DS.X.H.G.
0.5065.7Zm.5451.1.S1_atAI621979--8e-4At4g36970remorin family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.598.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.297.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.297.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.997.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.597.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.497.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM205373Mo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
5.096.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.096.7GSM205376B73xMo17 13 DAP endosperm tissue biological replicate 3GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-240Zm.5011.1.A1_atAF045570.1sterol methyltransferase1-2e-32At5g13710SMT1 (STEROL METHYLTRANSFERASE 1)C.G.S.X.
0.023e-136Zm.4973.1.S1_atAY104506.1hypothetical protein LOC100274164-2e-3At1g03457RNA-binding protein, putativeC.G.S.X.
0.023e-136Zm.11599.1.A1_atBM379225--5e+0At5g59990-C.G.S.X.
0.024e+032ZmAffx.406.6.A1_atAI670428--1e+1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)C.G.S.X.
0.024e+032ZmAffx.406.6.S1_atAI670428--1e+1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)C.G.S.X.
0.014e+032Zm.9503.1.A1_atBM269403hypothetical protein LOC100191795-2e-3At1g63700YDA (YODA)C.G.S.X.
0.014e+032Zm.8992.1.S1_atAY103691.1glyceraldehyde-3-phosphate dehydrogenase, cytosolic-5e-58At1g79530GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1)C.G.S.X.
0.014e+032Zm.7709.1.A1_atBM269078hypothetical protein LOC100280092-5e-1At1g71695peroxidase 12 (PER12) (P12) (PRXR6)C.G.S.X.
0.014e+032Zm.648.1.S1_atAF144079.1S-adenosyl-L-methionine:L-methionine S-methyltransferase-6e-19At5g49810MMTC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Arabidopsis thalianaAt5g59470836066PQ-loop repeat family protein / transmembrane family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;MPFO---C.G.S.X.
0.083e-1067Glycine maxGma.7782.1.S1_atCD405058--7e+0At5g67370unknown proteinC.G.S.X.
0.5801041Hordeum vulgareContig7162_atContig7162--2e-11At2g41620nucleoporin interacting component family proteinC.G.S.X.
0.4401140Oryza sativaOs03g0349000AK099999.1-Nucleoporin interacting component family protein3e-14At2g41620nucleoporin interacting component family proteinC.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.206432.1.S1_atpmrna12772--7e+0At5g63065-C.G.S.X.
0.432e-149529Triticum aestivumTaAffx.114677.1.S1_atCA659671--1e-8At2g41620nucleoporin interacting component family proteinC.G.S.X.
0.022e-136Vitis vinifera1615119_atCD006475--3e-1At4g28025unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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