Gene omics information

Query gene ID Zm.13494.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.13494.1.A1_atAY108782.1--4e-1At2g17300unknown proteinS.X.H.G.
0.8094.0Zm.5451.1.S1_atAI621979--8e-4At4g36970remorin family proteinS.X.H.G.
0.7792.1Zm.19299.1.A1_atBM074654--4e-3At4g09270unknown proteinS.X.H.G.
0.7188.2Zm.5413.1.A1_atAY112255.1hypothetical protein LOC100274255-5e+0At2g19340membrane protein, putativeS.X.H.G.
0.6785.8Zm.13523.1.A1_atAY108425.1--6e-1At5g59470PQ-loop repeat family protein / transmembrane family proteinS.X.H.G.
0.6381.1Zm.13751.1.S1_atAY105922.1--9e+0At3g01700AGP11S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
35.499.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.899.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.699.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.199.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.899.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.999.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.799.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.799.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.299.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.597.1GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9901443Zm.13494.1.S1_atAY108782.1--4e-1At2g17300unknown proteinC.G.S.X.
0.012e-136Zm.9806.1.S1_atBM339423hypothetical protein LOC100278385-2e-2At2g47180AtGolS1 (Arabidopsis thaliana galactinol synthase 1)C.G.S.X.
0.033e+032ZmAffx.114.1.A1_atAI665586--9e-13At5g18100CSD3 (copper/zinc superoxide dismutase 3)C.G.S.X.
0.033e+032ZmAffx.114.1.S1_atAI665586--9e-13At5g18100CSD3 (copper/zinc superoxide dismutase 3)C.G.S.X.
0.013e+032Zm.10720.1.A1_atAI461586--3e+0At5g53620unknown proteinC.G.S.X.
0.031e+130ZmAffx.763.1.A1_atAI746058hypothetical protein LOC100273638-2e+0At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.031e+130ZmAffx.763.1.S1_atAI746058--2e+0At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedC.G.S.X.
0.021e+130Zm.8744.1.A1_atBM351252--1e+0At5g67490unknown proteinC.G.S.X.
0.011e+130Zm.8507.1.A1_atBM074458hypothetical protein LOC100276220-8e-1At4g20280TAF11 (TBP-ASSOCIATED FACTOR 11)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-136Arabidopsis thalianaAt2g17300816236unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.045e-136Glycine maxGmaAffx.24419.1.S1_atBG652901--6e-1At3g44740ATP binding / aminoacyl-tRNA ligase/ glycine-tRNA ligase/ nucleotide bindingC.G.S.X.
0.850817Hordeum vulgareContig15882_s_atContig15882--3e-1At5g07220ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3)C.G.S.X.
0.440950Oryza sativaOs12g0448900BQ907039-Animal haem peroxidase family protein6e+0At5g13190-C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.222721.1.S1_atpmrna40318hypothetical protein-6e+0At4g24265unknown proteinC.G.S.X.
0.640894Triticum aestivumTa.22602.1.S1_a_atCA615597--2e+0At3g01420DOX1C.G.S.X.
0.037e+030Vitis vinifera1621619_atCF405444hypothetical protein LOC100255167-3e-10At4g00490BAM2 (BETA-AMYLASE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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