Gene omics information

Query gene ID Zm.13485.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5976.1Zm.13485.1.S1_atAY108893.1--3e-1At5g16540ZFN3 (ZINC FINGER NUCLEASE 3)S.X.H.G.
0.6785.8Zm.17767.1.A1_atCK371577hypothetical protein LOC100191424-4e-1At2g14365LCR84 (Low-molecular-weight cysteine-rich 84)S.X.H.G.
0.4455.7RPTR-Zm-X17220-1_atRPTR-Zm-X17220-1--0S.X.H.G.
0.4048.5RPTR-Zm-J01636-1_atRPTR-Zm-J01636-1--0S.X.H.G.
0.3742.3Zm.1079.4.S1_x_atAY109373.1--2e-2At5g14740CA2 (CARBONIC ANHYDRASE 2)S.X.H.G.
0.3538.9Zm.13661.1.A1_atAY107142.1--2e+0At4g25710kelch repeat-containing F-box family proteinS.X.H.G.
0.2622.7Zm.2768.1.A1_atAW067159Hypothetical protein LOC100193535-1e+0At5g04760myb family transcription factorS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
7.497.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.397.4GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.397.4GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.197.4GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.197.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.997.3GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.997.3GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.897.2GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
5.897.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.897.2GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9701033Zm.13485.1.A1_atAY108893.1--3e-1At5g16540ZFN3 (ZINC FINGER NUCLEASE 3)C.G.S.X.
0.022e+032Zm.8200.1.S1_atBM379197BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-5e-1At5g21090leucine-rich repeat protein, putativeC.G.S.X.
0.022e+032Zm.7881.1.A1_a_atBM080283--3e-3At4g24590unknown proteinC.G.S.X.
0.012e+032Zm.7023.1.S1_atAY103886.1hypothetical protein LOC100276161-4e+0At5g50370adenylate kinase, putativeC.G.S.X.
0.032e+032Zm.16334.1.A1_atBM266447protein transport protein SEC61 gamma subunit-3e-17At5g50460protein transport protein SEC61 gamma subunit, putativeC.G.S.X.
0.017e+030Zm.807.1.A1_atBG836005hypothetical protein LOC100216722-5e-2At4g14880OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)C.G.S.X.
0.027e+030Zm.5946.1.A1_atCF633416CID11-7e-10At3g14450CID9 (CTC-Interacting Domain 9)C.G.S.X.
0.017e+030Zm.5796.1.S1_atAI649702--3e-41At1g62750SCO1 (SNOWY COTYLEDON 1)C.G.S.X.
0.017e+030Zm.5796.1.A1_atBM332299--3e-41At1g62750SCO1 (SNOWY COTYLEDON 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e-136Arabidopsis thalianaAt5g16540831516ZFN3 (ZINC FINGER NUCLEASE 3)Encodes a zinc finger protein.---C.G.S.X.
0.032e+034Glycine maxHgAffx.23042.1.S1_atBF014808--4e+0At2g41100TCH3 (TOUCH 3)C.G.S.X.
0.388e-37153Hordeum vulgareContig18711_atContig18711--8e-2At1g48300unknown proteinC.G.S.X.
0.192e-71270Oryza sativaOs05g0353400AB011270.1-Importin-beta, N-terminal domain containingprotein2e-9At5g53480importin beta-2, putativeC.G.S.X.
0.051e+034Populus trichocarpaPtpAffx.161704.1.S1_atCK104164--4e-1At5g57120-C.G.S.X.
0.313e-44178Triticum aestivumTa.6282.3.S1_atCA648748--4e+0At4g23760unknown proteinC.G.S.X.
0.033e-134Vitis vinifera1617272_atCF518232zinc finger RING-type protein-like-1e-3At3g54780zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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