Gene omics information

Query gene ID Zm.13431.1.S1_at
Gene name hypothetical LOC542282
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7892.5Zm.13431.1.S1_atAY110841.1hypothetical LOC542282-2e+0At3g54940-S.X.H.G.
0.8796.4Zm.17753.1.S1_atCK371208Hypothetical protein LOC100192575-7e-1At3g57950unknown proteinS.X.H.G.
0.8094.0Zm.13627.1.S1_atAY107420.1--3e-1At2g22200AP2 domain-containing transcription factorS.X.H.G.
0.7288.6Zm.6588.1.A1_atBM080221hypothetical protein LOC100192010-5e-23At1g78630emb1473 (embryo defective 1473)S.X.H.G.
0.6481.7Zm.6567.1.A1_atBM072999--2e+0At5g41030TCP family transcription factor, putativeS.X.H.G.
0.6077.8Zm.3518.1.A1_atBM337627--1e+0At2g22000PROPEP6 (Elicitor peptide 6 precursor)S.X.H.G.
0.5875.1Zm.18877.1.A1_atCO529651protein phosphatase 2C-3e-1At4g16580catalyticS.X.H.G.
0.5875.1Zm.5850.1.A1_atCF623894--2e-7At4g04910NSF (N-ethylmaleimide sensitive factor)S.X.H.G.
0.5775.1Zm.889.3.S1_atAI834601--3e-4At4g38740ROC1 (ROTAMASE CYP 1)S.X.H.G.
0.5065.7Zm.11730.1.S1_atBM380273hypothetical protein LOC100272845-2e-26At4g38970fructose-bisphosphate aldolase, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
27.499.7GSM206305Right pulvinus control polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
21.699.4GSM206299Left pulvinus control polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
17.799.1GSM206308Lower pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
17.499.1GSM206302Upper pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
17.099.1GSM206306Lower pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
16.999.1GSM206287Left pulvinus control total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
16.199.0GSM206307Lower pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
11.598.6GSM206300Upper pulvinus 2 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
11.198.5GSM206303Upper pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
10.598.4GSM206309Lower pulvinus 30 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.8801602Zm.13431.1.A1_atAY110841.1hypothetical LOC542282-2e+0At3g54940-C.G.S.X.
0.031e-1169Zm.5565.1.S2_atCF631185hypothetical protein LOC100194102-9e-11At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)C.G.S.X.
0.031e-1169Zm.5565.1.S1_atD45402.1cysteine protease1-9e-11At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)C.G.S.X.
0.035e-548Zm.14983.2.A1_atAY109416.1--3e-5At5g27150NHX1 (NA+/H+ EXCHANGER)C.G.S.X.
0.035e-548Zm.14983.2.S1_atCO524096--5e-10At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)C.G.S.X.
0.032e-446Zm.9879.2.S1_atCA404875vignain-5e-5At4g35350XCP1 (XYLEM CYSTEINE PEPTIDASE 1)C.G.S.X.
0.052e-446Zm.7736.1.S1_atAF019146.1maize insect resistance2-4e-3At2g34080cysteine proteinase, putativeC.G.S.X.
0.092e-446Zm.2276.1.S1_atCO531514thiol protease SEN102-3e+0At1g61730DNA-binding storekeeper protein-relatedC.G.S.X.
0.042e-446Zm.12475.1.S1_atAW600588--8e-1At3g54940-C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Arabidopsis thalianaAt3g54940824659-----C.G.S.X.
0.043e+034Glycine maxPsAffx.CL2624Contig1_atPsAffx.CL2624Contig1--5e+0At3g26935zinc finger (DHHC type) family proteinC.G.S.X.
0.072e-550Hordeum vulgareContig6776_s_atContig6776--2e-3At1g20850XCP2 (xylem cysteine peptidase 2)C.G.S.X.
0.082e-552Oryza sativaOs.8360.1.S1_at---0C.G.S.X.
0.056e-136Populus trichocarpaPtpAffx.249.79.A1_atBP932784hypothetical protein-2e-14At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)C.G.S.X.
0.092e-963Triticum aestivumTa.5004.1.S1_atCA721837--8e-3At5g50260cysteine proteinase, putativeC.G.S.X.
0.031e-136Vitis vinifera1608456_atCB971487hypothetical protein LOC100250141-4e-14At5g50260cysteine proteinase, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage