Gene omics information

Query gene ID Zm.134.1.S1_at
Gene name Zea AGAMOUS homolog2
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9199.0Zm.134.1.S1_atU31521.1Zea AGAMOUS homolog2-5e-11At2g42830SHP2 (SHATTERPROOF 2)S.X.H.G.
0.9199.0Zm.13400.1.A1_atAF457956.1--6e-1At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)S.X.H.G.
0.9199.0Zm.2565.1.A1_atAY112147.1--2e+0At4g28050TET7 (TETRASPANIN7)S.X.H.G.
0.8395.6Zm.2568.1.A1_a_atBM079095hypothetical protein LOC100276990-6e+0At3g17070peroxidase, putativeS.X.H.G.
0.8395.6Zm.2569.1.A1_atCF635472agmatine coumaroyltransferase-7e+0At4g27900-S.X.H.G.
0.7188.2Zm.13400.1.S1_atAF457956.1--6e-1At4g32850nPAP (NUCLEAR POLY(A) POLYMERASE)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
33.099.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.699.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.599.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.399.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.099.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.899.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.198.0GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.697.9GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.497.8GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
7.097.7GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7401166Zm.270.1.S1_atU31522.1hypothetical protein LOC100216659-8e-19At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.132e-54212Zm.133.1.S1_atL18924.1homologue of Arabidopsis gene AGAMOUS-5e-8At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.143e-53208Zm.14826.1.A1_atAJ430637.1m23 protein-2e-16At4g18960AG (AGAMOUS)C.G.S.X.
0.143e-53208Zm.14826.1.S1_atAJ430637.1m23 protein-2e-16At2g42830SHP2 (SHATTERPROOF 2)C.G.S.X.
0.145e-52204Zm.3907.1.S1_atL81162.2AGAMOUS-like protein /// M2 protein-3e-15At4g18960AG (AGAMOUS)C.G.S.X.
0.126e-33141Zm.5851.10.A1_a_atX85336.1ZEM3-2e-9At4g18960AG (AGAMOUS)C.G.S.X.
0.122e-30133Zm.5851.6.S1_x_atL46399.1MADS box protein-2e-8At4g18960AG (AGAMOUS)C.G.S.X.
0.122e-30133Zm.5851.6.A1_a_atL46399.1MADS box protein-2e-8At4g18960AG (AGAMOUS)C.G.S.X.
0.112e-29129Zm.5851.8.A1_a_atX85334.1MADS box protein-1e-7At4g18960AG (AGAMOUS)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.135e-1169Arabidopsis thalianaAt2g42830818883SHP2 (SHATTERPROOF 2)AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).---C.G.S.X.
0.182e-861Glycine maxGmaAffx.79004.1.S1_atBU761215MADS-box protein-2e-17At4g18960AG (AGAMOUS)C.G.S.X.
0.162e-52206Hordeum vulgareContig3831_atContig3831--3e-15At4g18960AG (AGAMOUS)C.G.S.X.
0.381e-86321Oryza sativaOs12g0207000AY551912.1-Transcription factor9e-21At3g58780SHP1 (SHATTERPROOF 1)C.G.S.X.
0.164e-1893Populus trichocarpaPtpAffx.43839.1.S1_atDN501305hypothetical protein-3e-23At4g09960STK (SEEDSTICK)C.G.S.X.
0.398e-130464Triticum aestivumTa.27776.1.S1_atBJ274612MADS-box transcription factor TaAGL2-3e-12At4g18960AG (AGAMOUS)C.G.S.X.
0.172e-1065Vitis vinifera1621836_atAF373604.1MADS-box protein 5-2e-9At4g09960STK (SEEDSTICK)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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