Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title 15.2 98.9 GSM320465 protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 12.1 98.6 GSM320449 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 10.5 98.4 GSM320455 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 10.3 98.4 GSM320454 protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 8.7 98.1 GSM320470 protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 8.7 98.1 GSM320456 protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 8.6 98.1 GSM320451 protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 7.6 97.9 GSM320468 protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 7.3 97.8 GSM320458 protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes 6.2 97.4 GSM320447 protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 GSE12770 Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
Click HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB 0.04 3e-1 36 Arabidopsis thaliana At2g21660 816705 CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2) Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). - - - C.G. S.X. Please select ath TAIR (integral) ath,osa KEGG (integral) ath PlantTribes (integral) ath,osa Gramene (integral) ath MPSS (genome) ath InParanoid (ortholog) ath Plant RBP (ortholog) ath SIGnAL (T-DNA) ath RAFL (full-length clone) ath AtGDB (genome) ath Genevestigator (expression) ath,ptr eFP Browser (expression) ath AVT (expression) ath ATTED-II (co-expression) ath AtcisDB (cis-element) ath SUBA (hydropathy) ath AtProteome ath Plant Proteome Database ath PMN (pathway) ath,osa KaPPA-View 4 (pathway) ath RnR (over-expression) ath iHOP (report) 0.04 4e-1 36 Glycine max Gma.2090.2.S1_at BM893511 - - 3e-4 At4g21450 vesicle-associated membrane family protein / VAMP family protein C.G. S.X. Please select 0.07 2e-6 52 Hordeum vulgare Contig10170_at Contig10170 - - 3e+0 At3g29280 unknown protein C.G. S.X. Please select 0.22 8e-28 125 Oryza sativa Os.54494.2.A1_at - - - 0 C.G. S.X. Please select ath,osa KEGG (integral) ath,osa Gramene (integral) ath,osa KaPPA-View 4 (pathway) 0.06 2e+0 34 Populus trichocarpa PtpAffx.220828.1.S1_s_at pmrna37274 hypothetical protein - 6e-1 At5g14000 anac084 (Arabidopsis NAC domain containing protein 84) C.G. S.X. Please select ath,ptr eFP Browser (expression) 0.15 5e-6 52 Triticum aestivum TaAffx.12319.1.A1_at BJ272317 - - 1e+0 At5g52750 heavy-metal-associated domain-containing protein C.G. S.X. Please select 0.04 2e-2 38 Vitis vinifera 1610902_at BQ800284 - - 2e+0 At4g19390 - C.G. S.X. Please select
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