Gene omics information

Query gene ID Zm.13345.2.A1_x_at
Gene name hypothetical protein LOC100279020
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5775.1Zm.13345.2.A1_x_atCD435730hypothetical protein LOC100279020-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinS.X.H.G.
0.9199.0Zm.18974.1.A1_atBQ539399hypothetical protein LOC100272472-3e-1At1g17147-S.X.H.G.
0.7389.9Zm.14759.1.S1_atCB280800hypothetical protein LOC100191677-4e-2At5g46640DNA-binding family proteinS.X.H.G.
0.7389.9Zm.5884.1.A1_atBM340350hypothetical protein LOC100192097-8e-2At2g35880-S.X.H.G.
0.4658.4Zm.13551.1.A1_atAY108205.1--2e+0At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)S.X.H.G.
0.2724.6Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
19.199.2GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
17.399.1GSM162265Wild type 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
11.398.5GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
10.498.4GSM205420Mo17 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
9.098.2GSM205421B73 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
8.498.1GSM205436B73xMo17 19 DAP endosperm tissue biological replicate 3GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
8.198.0GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.397.8GSM205429B73xMo17 19 DAP endosperm tissue biological replicate 2GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.397.8GSM205422Mo17xB73 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
7.297.8GSM202311Mo17xB73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.7601187Zm.13345.5.A1_x_atBM337190z1A alpha zein protein /// z1A alpha zein protein /// hypothetical protein LOC100275744 /// hypothetical protein LOC100279024 /// Zein-alpha PMS2-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.8001076Zm.13345.4.A1_x_atCD446527hypothetical protein LOC100279020-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.670858Zm.13345.6.A1_x_atCA402028hypothetical protein LOC100279020-2e-2At2g30310GDSL-motif lipase/hydrolase family proteinC.G.S.X.
0.570777Zm.2517.4.A1_x_atCA399084z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// z1A alpha zein protein /// hypothetical protein LOC100274904 /// zein polypeptidesL2b-2e+0At5g62360invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.730636Zm.2517.2.A1_x_atM29627.1hypothetical protein LOC100101518-2e+0At3g03460unknown proteinC.G.S.X.
0.552e-180630Zm.13345.7.A1_x_atAI665090z1A alpha zein protein-2e-1At5g38610invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.583e-170597Zm.2517.3.A1_x_atAF371272.1zein polypeptidesL2b-9e-1At5g62360invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.583e-170597Zm.2517.3.A1_atAF371272.1zein /// zein polypeptidesL2b-9e-1At5g62360invertase/pectin methylesterase inhibitor family proteinC.G.S.X.
0.644e-169593Zm.2517.1.A1_atAF371269.1zein polypeptidesL2b-2e+0At3g03460unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+034Arabidopsis thalianaAt5g62360836357invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:cellular_component unknown;PFO---C.G.S.X.
0.036e-136Glycine maxGmaAffx.43718.1.S1_atCA935453--4e+0At3g55380UBC14 (ubiquitin-conjugating enzyme 14)C.G.S.X.
0.029e-134Hordeum vulgareContig18676_atContig18676--2e+0At5g11640-C.G.S.X.
0.034e+034Oryza sativaOs02g01385009630.m00372-Hypothetical protein6e-5At5g15740unknown proteinC.G.S.X.
0.034e-240Populus trichocarpaPtpAffx.210024.1.S1_atpmrna19757hypothetical protein-3e-1At5g15440EDL1 (EID1-like 1)C.G.S.X.
0.594e-57222Triticum aestivumTa.20780.1.S1_a_atCA622184--2e+0At4g33690unknown proteinC.G.S.X.
0.035e-134Vitis vinifera1612824_atCD712593--3e+0At3g28230-C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage