Gene omics information

Query gene ID	Zm.13315.1.S1_at
Gene name	pairing protein meu13-like
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	65.7	Zm.13315.1.S1_at	CA827618	pairing protein meu13-like	-	9e-15	At1g13330	-	S.X.	H.G.	Please select
0.48	61.3	Zm.15314.1.S1_at	CF972544	-	-	1e-11	At3g06080	unknown protein	S.X.	H.G.	Please select
0.46	58.4	Zm.10375.1.S1_at	BQ703821	-	-	2e-17	At2g35360	ubiquitin family protein	S.X.	H.G.	Please select
0.44	55.7	Zm.8911.1.A1_at	BM350783	-	-	4e-2	At5g23540	26S proteasome regulatory subunit, putative	S.X.	H.G.	Please select
0.27	24.6	ZmAffx.788.1.A1_at	AI759113	-	-	8e-1	At4g33925	unknown protein	S.X.	H.G.	Please select
0.25	21.3	Zm.2269.1.S1_at	CF631922	-	-	1e-7	At5g51820	PGM (PHOSPHOGLUCOMUTASE)	S.X.	H.G.	Please select
0.12	5.9	Zm.4230.1.S1_at	CO523811	-	-	4e-5	At1g17650	GLYR2 (GLYOXYLATE REDUCTASE 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
25.6	99.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.5	99.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.4	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.6	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.1	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.5	98.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.5	98.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.6	97.1	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP
4.5	96.3	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	8e-1	34	Zm.2104.1.A1_at	BM266401	hypothetical protein LOC100279029	-	2e+0	At3g62880	ATOEP16-4	C.G.	S.X.	Please select
0.02	3e+0	32	ZmAffx.850.1.A1_at	AI770642	-	-	2e-10	At3g57880	C2 domain-containing protein	C.G.	S.X.	Please select
0.02	3e+0	32	ZmAffx.850.1.S1_at	AI770642	-	-	2e-10	At3g57880	C2 domain-containing protein	C.G.	S.X.	Please select
0.02	3e+0	32	ZmAffx.528.1.A1_at	AI711688	-	-	2e-1	At1g80420	DNA repair protein, putative (XRCC1)	C.G.	S.X.	Please select
0.02	3e+0	32	ZmAffx.528.1.S1_at	AI711688	-	-	2e-1	At1g80420	DNA repair protein, putative (XRCC1)	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9124.2.S1_at	BM340636	-	-	5e-1	At5g32470	-	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9111.2.A1_a_at	BM266662	flavoprotein wrbA	-	3e-1	At4g27270	quinone reductase family protein	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.9111.2.A1_x_at	BM266662	flavoprotein wrbA	-	3e-1	At4g27270	quinone reductase family protein	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.8865.1.A1_at	BM267927	hypothetical protein LOC100191271	-	3e-9	At5g35460	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	9e-15	81	Arabidopsis thaliana	At1g13330	837893	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFAPV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	3e-3	44	Glycine max	GmaAffx.85831.1.S1_at	BF008815	-	-	1e-28	At5g41310	kinesin motor protein-related	C.G.	S.X.	Please select
0.03	2e-1	36	Hordeum vulgare	HV_CEa0001E19r2_at	HV_CEa0001E19r2	-	-	4e+1	At5g09461	CPuORF43 (Conserved peptide upstream open reading frame 43)	C.G.	S.X.	Please select
0.56	1e-169	597	Oryza sativa	Os03g0710100	AK069094.1	-	Protein kinase domain containing protein	2e-3	At1g13330	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.09	1e-5	52	Populus trichocarpa	PtpAffx.46490.1.S1_at	CN549671	hypothetical protein	-	2e-2	At1g13330	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e-1	38	Triticum aestivum	TaAffx.134779.1.S1_at	CA607795	-	-	4e+0	At3g28270	-	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1614311_at	CF516097	hypothetical protein LOC100264243	-	2e-6	At1g15780	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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