Gene omics information

Query gene ID Zm.13280.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9699.8Zm.13280.1.S1_atCA826511--4e+0At5g18748unknown proteinS.X.H.G.
0.4455.7Zm.14566.1.S1_atBM381341photosystem II 11 kD protein-4e-1At2g05510glycine-rich proteinS.X.H.G.
0.4149.7Zm.17338.4.A1_atAI670678Hypothetical protein LOC100193489-3e+0At5g27820ribosomal protein L18 family proteinS.X.H.G.
0.3945.6Zm.5579.1.A1_atCF630296fumarylacetoacetate hydrolase domain-containing protein 1-1e-1At3g16700fumarylacetoacetate hydrolase family proteinS.X.H.G.
0.3844.2Zm.13558.1.A1_atBQ163517--1e-3At1g26340CB5-A (CYTOCHROME B5 ISOFORM A)S.X.H.G.
0.3131.6Zm.6166.2.A1_atCO529261hypothetical protein LOC100278925-6e-2At1g13870DRL1 (DEFORMED ROOTS AND LEAVES 1)S.X.H.G.
0.2828.1Zm.2197.1.S1_a_atAF007785.1cystathionine gamma-synthase1-6e-5At3g01120MTO1 (METHIONINE OVERACCUMULATION 1)S.X.H.G.
0.2828.1Zm.12617.1.A1_atBU050965--1e+0At3g13920EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1)S.X.H.G.
0.2622.7Zm.584.4.S1_atAY104089.1pericarp color1-3e-8At4g38620MYB4S.X.H.G.
0.2622.7Zm.4541.1.S1_atAY104176.1hypothetical protein LOC100274427-5e-8At5g67400peroxidase 73 (PER73) (P73) (PRXR11)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
41.999.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.799.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.099.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.899.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.699.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.099.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.095.8GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.095.8GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.595.1GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.041e-136Zm.10431.1.S1_atBQ485377--1e+1At5g01300phosphatidylethanolamine-binding family proteinC.G.S.X.
0.024e-134Zm.566.1.S1_atAF244706.1glutathione transferase41-1e+1At3g09280unknown proteinC.G.S.X.
0.034e-134Zm.1954.1.A1_atAY104136.1--1e+0At5g18748unknown proteinC.G.S.X.
0.034e-134Zm.1954.1.S1_atAY104136.1hypothetical protein LOC100278554-4e+0At5g67620unknown proteinC.G.S.X.
0.034e-134Zm.18453.1.A1_atCO523307LOL3-5e+0At2g28700AGL46 (AGAMOUS-LIKE 46)C.G.S.X.
0.022e+032Zm.949.1.A1_atCF624182--1e-1At5g15970KIN2C.G.S.X.
0.022e+032Zm.949.1.A1_s_atCF624182hypothetical protein LOC100280024-1e-1At5g15970KIN2C.G.S.X.
0.022e+032Zm.6885.1.S1_atAY106322.1cell division control protein 50-6e-1At3g12740ALIS1 (ALA-INTERACTING SUBUNIT 1)C.G.S.X.
0.022e+032Zm.4032.1.S1_atAI833985--7e+0At3g22961-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt5g187486241062unknown proteinF:unknown;P:unknown;C:unknown---C.G.S.X.
0.036e+032Glycine maxPsAffx.psMY004iG07r_atPsAffx.psMY004iG07r--3e+0At1g16470PAB1 (PROTEASOME SUBUNIT PAB1)C.G.S.X.
0.042e+032Hordeum vulgareHV_CEa0014A14r2_atHV_CEa0014A14r2--3e+0At5g48945LCR46 (Low-molecular-weight cysteine-rich 46)C.G.S.X.
0.032e+034Oryza sativaOsAffx.8825.1.S1_x_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.75951.1.A1_atCV250683--7e+0At4g29170ATMND1C.G.S.X.
0.061e-344Triticum aestivumTa.18481.1.S1_atCA637664--2e+0At3g42180catalytic/ transferase, transferring glycosyl groupsC.G.S.X.
0.033e-134Vitis vinifera1620074_atCD713563hypothetical protein LOC100244152-2e-39At3g22930calmodulin, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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