Gene omics information

Query gene ID	Zm.1306.1.A1_at
Gene name
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	88.2	Zm.1306.1.A1_at	AY111772.1	-	-	1e-3	At2g28790	osmotin-like protein, putative	S.X.	H.G.	Please select
0.55	71.6	Zm.13063.1.A1_at	CA403963	-	-	1e+0	At3g23290	-	S.X.	H.G.	Please select
0.50	65.7	Zm.312.1.A1_at	S72425.1	ADP-glucose pyrophosphorylase	-	2e-14	At5g48300	ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1)	S.X.	H.G.	Please select
0.44	55.7	Zm.13062.1.A1_at	BG268629	Hypothetical protein LOC100193834	-	2e-1	At4g33750	-	S.X.	H.G.	Please select
0.36	41.3	Zm.584.4.A1_at	AY104089.1	pericarp color1	-	3e-8	At4g38620	MYB4	S.X.	H.G.	Please select
0.23	18.6	Zm.14272.3.S1_at	BG835930	Corn cystatin I	-	1e-7	At5g05110	cysteine protease inhibitor, putative / cystatin, putative	S.X.	H.G.	Please select
0.18	11.6	Zm.716.1.A1_at	CO521300	hypothetical protein LOC100279404	-	5e+0	At5g57535	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
33.1	99.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.3	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
26.7	99.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
25.6	99.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.0	99.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.5	99.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.0	99.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.3	99.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.9	98.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320463	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.98	0	1078	Zm.1306.1.S1_at	AY111772.1	osmotin-like protein	-	1e-3	At2g28790	osmotin-like protein, putative	C.G.	S.X.	Please select
0.03	1e-4	46	Zm.10159.1.A1_at	BM350333	thaumatin-like protein	-	1e-1	At4g14060	major latex protein-related / MLP-related	C.G.	S.X.	Please select
0.03	3e-2	38	Zm.8383.1.A1_at	BM078678	PCO062666 protein	-	4e-1	At5g47960	ATRABA4C	C.G.	S.X.	Please select
0.04	1e-1	36	Zm.13809.1.A1_at	AY104739.1	hypothetical protein LOC100275407	-	1e+0	At2g30870	GSTF10 (HALIANA GLUTATHIONE S-TRANSFERASE PHI 10)	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.1230.1.A1_at	CA403072	hypothetical protein LOC100191965	-	2e+0	At4g05070	unknown protein	C.G.	S.X.	Please select
0.02	5e-1	34	Zm.281.1.S1_s_at	U06831.1	hypothetical LOC542299	-	2e+0	At5g55170	SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3)	C.G.	S.X.	Please select
0.02	5e-1	34	Zm.281.1.S1_at	U06831.1	hypothetical LOC542299	-	2e+0	At5g55170	SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3)	C.G.	S.X.	Please select
0.02	5e-1	34	Zm.16355.1.A1_at	CF349220	-	-	2e-4	At1g59740	proton-dependent oligopeptide transport (POT) family protein	C.G.	S.X.	Please select
0.03	5e-1	34	Zm.14283.4.S1_at	BG841525	hypothetical protein LOC100192676	-	2e-6	At5g47570	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-3	44	Arabidopsis thaliana	At2g28790	817428	osmotin-like protein, putative	F:molecular_function unknown;P:response to other organism;C:plant-type cell wall;PFMBO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	1e-1	38	Glycine max	PsAffx.C72000063_s_at	PsAffx.C72000063	-	-	1e+0	At5g63150	unknown protein	C.G.	S.X.	Please select
0.31	1e-85	315	Hordeum vulgare	Contig9094_at	Contig9094	-	-	2e-3	At2g28790	osmotin-like protein, putative	C.G.	S.X.	Please select
0.32	2e-127	456	Oryza sativa	Os.28139.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	4e-1	36	Populus trichocarpa	PtpAffx.214298.1.S1_at	pmrna27807	hypothetical protein	-	3e+0	At4g31470	pathogenesis-related protein, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.44	9e-88	323	Triticum aestivum	Ta.4586.1.A1_at	CK205966	-	-	1e-3	At2g28790	osmotin-like protein, putative	C.G.	S.X.	Please select
0.10	9e-11	65	Vitis vinifera	1610791_at	CF373779	-	-	4e-4	At2g28790	osmotin-like protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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