Gene omics information

Query gene ID Zm.13002.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7188.2Zm.13002.1.S1_atCF041204--1e-10At4g27230HTA2 (histone H2A)S.X.H.G.
0.9299.2Zm.13401.1.A1_atAF457954.1--4e-19At1g48850EMB1144 (embryo defective 1144)S.X.H.G.
0.9299.2Zm.3545.1.A1_atBM267030translation initiation factor 5A-4e-20At1g69410ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)S.X.H.G.
0.8996.8Zm.3357.1.A1_atBM347858hypothetical protein LOC100273400-1e+0At4g11020unknown proteinS.X.H.G.
0.8896.7Zm.3358.2.A1_atAY105740.1--7e+0At2g44420protein N-terminal asparagine amidohydrolase family proteinS.X.H.G.
0.8194.3Zm.17307.1.S1_atCK367910--4e+0At2g30370allergen-relatedS.X.H.G.
0.8094.0Zm.13401.1.S1_atAF457954.1--4e-19At1g48850EMB1144 (embryo defective 1144)S.X.H.G.
0.8094.0Zm.3358.1.A1_atAI947857--7e+0At4g02970AT7SL-1 (Arabidopsis 7SL RNA 1)S.X.H.G.
0.7992.8Zm.2565.1.S1_atAY112147.1protein binding protein-2e+0At4g28050TET7 (TETRASPANIN7)S.X.H.G.
0.7792.1Zm.2566.1.S1_atBM079352--6e-7At5g56950NAP1S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
75.0100.0GSM258206W22 11-day seedling aerial tissue biological replicate 3GSE10237Gene expression variation among eight maize inbreds
70.0100.0GSM258200W22 11-day seedling aerial tissue biological replicate 1GSE10237Gene expression variation among eight maize inbreds
69.6100.0GSM258203W22 11-day seedling aerial tissue biological replicate 2GSE10237Gene expression variation among eight maize inbreds
15.599.0GSM253273ZM_4.5d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
5.897.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.697.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.095.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.692.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.592.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.492.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-87321Zm.14706.1.S1_atAY103710.1--2e-3At4g27230HTA2 (histone H2A)C.G.S.X.
0.374e-79293Zm.16911.1.A1_atBM332269--3e-11At4g27230HTA2 (histone H2A)C.G.S.X.
0.394e-76284Zm.15894.1.A1_atBG873874--3e-14At4g27230HTA2 (histone H2A)C.G.S.X.
0.412e-69262Zm.16259.1.A1_x_atBQ539455hypothetical protein LOC100273269-1e-6At4g27230HTA2 (histone H2A)C.G.S.X.
0.386e-66250Zm.16259.2.A1_x_atCD951359hypothetical protein LOC100273269-4e-7At4g27230HTA2 (histone H2A)C.G.S.X.
0.374e-64244Zm.6752.1.A1_atCK826604splicing factor, arginine/serine-rich 2-2e-6At4g27230HTA2 (histone H2A)C.G.S.X.
0.312e-56218Zm.13443.1.A1_atU08225.1Histone H2A-4e-11At5g02560HTA12C.G.S.X.
0.335e-51200Zm.888.1.S1_atCK828040hypothetical protein LOC100216750-1e-7At1g08880H2AXAC.G.S.X.
0.242e-35149Zm.4862.1.S1_a_atCF629721hypothetical protein LOC100273666-2e-27At4g27230HTA2 (histone H2A)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.111e-1067Arabidopsis thalianaAt4g27230828831HTA2 (histone H2A)Encodes HTA2, a histone H2A protein.---C.G.S.X.
0.311e-26121Glycine maxPsAffx.psZS009xF02f_atPsAffx.psZS009xF02f--3e-4At5g59870HTA6C.G.S.X.
0.423e-71268Hordeum vulgareContig137_x_atContig137--1e-6At1g08880H2AXAC.G.S.X.
0.381e-61238Oryza sativaOs03g0279200CA753594-Histone H2A1e-7At5g02560HTA12C.G.S.X.
0.064e-550Populus trichocarpaPtp.2116.1.A1_atCV234640--2e-21At5g59870HTA6C.G.S.X.
0.432e-61236Triticum aestivumTaAffx.128686.3.A1_atBQ802458--3e-1At4g27230HTA2 (histone H2A)C.G.S.X.
0.143e-238Vitis vinifera1608927_atCF512418hypothetical protein LOC100241700-2e+0At1g51060HTA10C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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