Gene omics information

Query gene ID Zm.12746.1.A1_at
Gene name somatic embryogenesis related protein
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5065.7Zm.12746.1.A1_atBU499218somatic embryogenesis related protein-1e+0At2g18530protein kinase family proteinS.X.H.G.
0.6785.8Zm.16824.1.S1_atCF602732SAM domain family protein-5e-1At3g07170sterile alpha motif (SAM) domain-containing proteinS.X.H.G.
0.6077.8ZmAffx.587.1.A1_atAI715015--3e+0At5g35900LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35)S.X.H.G.
0.4048.5Zm.18109.1.S1_atAI881274--3e+0At4g23340oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.3641.3ZmAffx.743.1.S1_atAI745735--8e-1At4g28170unknown proteinS.X.H.G.
0.3233.4Zm.7309.1.S1_atAF384036.1nucleosome/chromatin assembly factor A-2e-3At1g18800NRP2 (NAP1-RELATED PROTEIN 2)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
3.995.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.695.2GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.294.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.893.5GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.893.5GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo data
2.793.2GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.793.2GSM202297Mo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.793.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.793.2GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
2.692.9GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.016e-134ZmAffx.1455.1.S1_at11990232-22--0Atcg00350-C.G.S.X.
0.026e-134Zm.9316.1.A1_atCO534983hypothetical protein LOC100276829-4e-1At1g28210ATJ1C.G.S.X.
0.036e-134Zm.14114.1.A1_atAY104741.1C-terminal peptide-binding protein 1-6e-3At1g48580unknown proteinC.G.S.X.
0.036e-134Zm.14114.1.S1_atAY104741.1C-terminal peptide-binding protein 1-6e-3At1g48580unknown proteinC.G.S.X.
0.032e+032ZmAffx.1341.1.S1_at11990232-89--2e-119Atcg01090-C.G.S.X.
0.022e+032Zm.5461.1.A1_atBM080475--4e-4At4g39850PXA1 (PEROXISOMAL ABC TRANSPORTER 1)C.G.S.X.
0.022e+032Zm.4116.1.A1_atCF055002hypothetical protein LOC100191379-6e-1At5g48680sterile alpha motif (SAM) domain-containing proteinC.G.S.X.
0.022e+032Zm.13101.1.A1_atCA405173--4e-4At3g25420scpl21 (serine carboxypeptidase-like 21)C.G.S.X.
0.031e+130Zm.9092.1.A1_atBM266516hypothetical protein LOC100278247-1e+0At1g25260acidic ribosomal protein P0-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt2g18530816368protein kinase family proteinF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MOPFBVA---C.G.S.X.
0.048e+032Glycine maxGmaAffx.84129.1.A1_atCD410646--1e+1Atmg00480-C.G.S.X.
0.145e-548Hordeum vulgareContig25532_atContig25532--4e+0At5g19200short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.175e-1169Oryza sativaOs03g0203000AK065462.1-Hypothetical protein7e-1At3g56090ATFER3 (ferritin 3)C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.215423.1.S1_atpmrna29592hypothetical protein-2e+0At5g40500unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTa.28020.1.S1_x_atZ50867.1pollen allergen-like protein-5e+0At3g04945LCR18 (Low-molecular-weight cysteine-rich 18)C.G.S.X.
0.032e+032Vitis vinifera1616859_atCF514086hypothetical protein LOC100245186-4e+0At5g67490unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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