Gene omics information

Query gene ID Zm.12713.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5674.4Zm.12713.1.S1_atBI478939--1e-24At3g19170ATPREP1 (PRESEQUENCE PROTEASE 1)S.X.H.G.
0.6785.8Zm.12634.4.S1_a_atCF05712360S ribosomal protein L23-8e-61At1g0448060S ribosomal protein L23 (RPL23A)S.X.H.G.
0.5065.7Zm.697.1.A1_a_atAB102957.1histidine kinase 3-1e-17At5g35750AHK2 (ARABIDOPSIS HISTIDINE KINASE 2)S.X.H.G.
0.4048.5Zm.6684.1.S1_x_atCF01943160S ribosomal protein L29-4e-19At3g0670060S ribosomal protein L29 (RPL29A)S.X.H.G.
0.4048.5Zm.1881.1.S1_atCF011561--5e-1At3g17590BSH (BUSHY GROWTH)S.X.H.G.
0.3844.2Zm.12821.1.A1_atCA398688--1e+1At5g47320RPS19 (RIBOSOMAL PROTEIN S19)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.898.1GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.997.7GSM253274ZM_8d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
6.597.5GSM253276ZM_8d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
5.897.2GSM253264ZM_4d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
5.396.9GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.296.9GSM253262ZM_4d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
5.196.8GSM253275ZM_8d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.995.7GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.795.4GSM253263ZM_4d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.695.2GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.015e-136Zm.7047.1.S1_atAY111385.1SINA6-3e-19At3g61790seven in absentia (SINA) family proteinC.G.S.X.
0.012e+034Zm.9519.1.A1_atAY107523.1hypothetical protein LOC100193889-9e-7At2g25670unknown proteinC.G.S.X.
0.012e+034Zm.9519.1.A1_a_atAY107523.1hypothetical protein LOC100193889-9e-7At2g25670unknown proteinC.G.S.X.
0.017e+032ZmAffx.114.1.A1_atAI665586--9e-13At5g18100CSD3 (copper/zinc superoxide dismutase 3)C.G.S.X.
0.017e+032ZmAffx.114.1.S1_atAI665586--9e-13At5g18100CSD3 (copper/zinc superoxide dismutase 3)C.G.S.X.
0.017e+032Zm.719.2.S1_a_atBG320289thioredoxin M1-4e-1At1g11684unknown proteinC.G.S.X.
0.017e+032Zm.719.2.S1_x_atBG320289thioredoxin M1-4e-1At1g11684unknown proteinC.G.S.X.
0.017e+032Zm.719.2.S1_atBG320289thioredoxin M1-4e-1At1g11684unknown proteinC.G.S.X.
0.017e+032Zm.689.1.S1_atBM074684serine/threonine-protein kinase receptor-2e-6At3g09010protein kinase family proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.251e-24115Arabidopsis thalianaAt3g19170821451ATPREP1 (PRESEQUENCE PROTEASE 1)Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers---C.G.S.X.
0.127e-1583Glycine maxGma.7176.1.A1_atCD407127--8e-33At1g49630ATPREP2 (ARABIDOPSIS THALIANA PRESEQUENCE PROTEASE 2)C.G.S.X.
0.5401647Hordeum vulgareContig3760_atContig3760--2e-37At3g19170ATPREP1 (PRESEQUENCE PROTEASE 1)C.G.S.X.
0.5301628Oryza sativaOsAffx.24834.1.S1_at---0C.G.S.X.
0.132e-24115Populus trichocarpaPtp.1232.1.S1_atBI122968hypothetical protein-2e-19At1g49630ATPREP2 (ARABIDOPSIS THALIANA PRESEQUENCE PROTEASE 2)C.G.S.X.
0.5201158Triticum aestivumTa.545.1.S1_x_atCK164215--3e-16At3g19170ATPREP1 (PRESEQUENCE PROTEASE 1)C.G.S.X.
0.085e-31135Vitis vinifera1613390_atBQ794675hypothetical protein LOC100255619-5e-39At3g19170ATPREP1 (PRESEQUENCE PROTEASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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