Gene omics information

Query gene ID Zm.12546.2.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8094.0Zm.12546.2.A1_atAI770557--3e+0At5g56150UBC30 (ubiquitin-conjugating enzyme 30)S.X.H.G.
0.7188.2Zm.5289.2.A1_a_atAI600945hypothetical protein LOC100274172-1e-30At2g33040ATP synthase gamma chain, mitochondrial (ATPC)S.X.H.G.
0.6179.5Zm.19037.1.S1_atCA404446--1e-30At3g50530CRK (CDPK-related kinase)S.X.H.G.
0.5571.6Zm.455.2.A1_atBM078476dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex-2e-13At3g13930dihydrolipoamide S-acetyltransferase, putativeS.X.H.G.
0.2622.7Zm.17510.1.A1_atCK144409hypothetical protein LOC100217109-6e-22At1g08970NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9)S.X.H.G.
0.1912.8Zm.186.1.S1_atX71396.1Bowman-Birk type wound-induced proteinase inhibitor WIP1-1e+0At1g20000TAF11b (TBP-ASSOCIATED FACTOR 11b)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
8.098.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.297.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.697.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.497.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.896.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.796.5GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
4.496.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.095.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.895.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.695.2GSM206292Upper pulvinus 60 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
1.000807Zm.12546.2.A1_a_atAI770557ATP binding protein-3e+0At5g56150UBC30 (ubiquitin-conjugating enzyme 30)C.G.S.X.
1.000807Zm.12546.2.S1_a_atAI770557--3e+0At5g56150UBC30 (ubiquitin-conjugating enzyme 30)C.G.S.X.
0.391e-59228Zm.12546.1.A1_atAY104987.1ATP binding protein-2e+0At3g43440JAZ11 (JASMONATE-ZIM-DOMAIN PROTEIN 11)C.G.S.X.
0.191e-59228Zm.12546.1.S1_a_atAY104987.1--2e+0At3g43440JAZ11 (JASMONATE-ZIM-DOMAIN PROTEIN 11)C.G.S.X.
0.013e-134Zm.6032.1.A1_atAI668502hypothetical protein LOC100192630-9e-1At4g11600ATGPX6 (GLUTATHIONE PEROXIDASE 6)C.G.S.X.
0.031e+032Zm.9525.1.A1_atBM276820hypothetical protein LOC100274441-1e+0At5g11120unknown proteinC.G.S.X.
0.021e+032Zm.2618.1.S1_atCO520167hypothetical protein LOC100192576-1e-5At2g21510DNAJ heat shock N-terminal domain-containing proteinC.G.S.X.
0.011e+032Zm.10807.1.S1_atAY106975.1hypothetical protein LOC100280257-4e-19At3g16060kinesin motor family proteinC.G.S.X.
0.015e+030Zm.6559.1.A1_atCF051688--3e-14At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e+032Arabidopsis thalianaAt5g56150835714UBC30 (ubiquitin-conjugating enzyme 30)F:ubiquitin-protein ligase activity;P:ubiquitin-dependent protein catabolic process;C:cellular_component unknown;MFOPV---C.G.S.X.
0.053e-136Glycine maxGmaAffx.43169.1.A1_atCD405845--3e+0At3g21850ASK9 (ARABIDOPSIS SKP1-LIKE 9)C.G.S.X.
0.157e-1889Hordeum vulgareContig9982_atContig9982--1e-2At4g10730ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.141e-1687Oryza sativaOs03g0114300AK121970.1-Protein kinase domain containing protein6e-34At4g10730ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseC.G.S.X.
0.064e+032Populus trichocarpaPtpAffx.210609.1.S1_atpmrna20809hypothetical protein-3e-2At4g24750-C.G.S.X.
0.106e-1477Triticum aestivumTaAffx.45976.1.S1_atCA658318--7e+0At5g60650unknown proteinC.G.S.X.
0.046e-236Vitis vinifera1611250_atCB922487hypothetical protein LOC100249628-9e-4At4g24100protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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