Gene omics information

Query gene ID Zm.12534.1.A1_at
Gene name hypothetical protein LOC100192944
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4861.3Zm.12534.1.A1_atCF628471hypothetical protein LOC100192944-5e-5At5g20520WAV2 (WAVY GROWTH 2)S.X.H.G.
0.4658.4Zm.5851.6.S1_x_atL46399.1MADS box protein-2e-8At4g18960AG (AGAMOUS)S.X.H.G.
0.2928.1Zm.7755.1.A1_atCN845074hypothetical protein LOC100275494-3e-18At1g16460ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2)S.X.H.G.
0.2014.2Zm.18394.1.A1_atCO534001ATP-dependent Clp protease ATP-binding subunit clpX-1e-27At5g53350CLPXS.X.H.G.
0.072.9Zm.4664.3.S1_x_atAY108266.1--4e+0At5g65070MAF4 (MADS AFFECTING FLOWERING 4)S.X.H.G.
0.062.3Zm.13132.1.S1_atAY107386.1hypothetical protein LOC100274327-2e-7At1g55900TIM50S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.696.4GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
4.696.4GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.995.7GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
3.895.5GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydis
3.595.1GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydis
3.494.9GSM253281ZM_8d_SG200_3Alu_IIGSE10023Maize gene expression during infection with Ustilago maydis
3.194.3GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.993.8GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
2.893.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.893.5GSM375796Deep-sowing 10d treatment GA3, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e+034Zm.9806.1.S1_atBM339423hypothetical protein LOC100278385-2e-2At2g47180AtGolS1 (Arabidopsis thaliana galactinol synthase 1)C.G.S.X.
0.011e+034Zm.9418.1.S1_atAF493799.1DREB-like protein-4e-2At2g35700ERF38 (ERF FAMILY PROTEIN 38)C.G.S.X.
0.011e+034Zm.4985.1.A1_atCO533545ubiquitin-conjugating enzyme E2-17 kDa-2e-25At2g02760ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2)C.G.S.X.
0.011e+034Zm.18024.1.S1_atAY530730.1thylakoid assembly8-3e-2At1g54215proline-rich family proteinC.G.S.X.
0.011e+034Zm.14591.2.S1_atCK370886--2e-7At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)C.G.S.X.
0.015e+032Zm.8507.1.A1_atBM074458hypothetical protein LOC100276220-8e-1At4g20280TAF11 (TBP-ASSOCIATED FACTOR 11)C.G.S.X.
0.015e+032Zm.16024.2.S1_x_atCF02464240S ribosomal protein S24-9e-24At3g0492040S ribosomal protein S24 (RPS24A)C.G.S.X.
0.015e+032Zm.16024.1.S1_atAF298769.140S ribosomal protein S24-1e-26At3g0492040S ribosomal protein S24 (RPS24A)C.G.S.X.
0.015e+032Zm.16024.1.S1_a_atAF298769.140S ribosomal protein S24-1e-26At3g0492040S ribosomal protein S24 (RPS24A)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.155e-550Arabidopsis thalianaAt5g20520832174WAV2 (WAVY GROWTH 2)Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).---C.G.S.X.
0.091e-346Glycine maxGma.13971.1.S1_atCD412065--8e-22At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.560934Hordeum vulgareContig982_atContig982--2e-1At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.540888Oryza sativaOs07g0608300AK073927.1-Esterase/lipase/thioesterase domain containingprotein1e-2At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.102e-552Populus trichocarpaPtpAffx.74614.3.S1_atCV270110--2e-64At5g20520WAV2 (WAVY GROWTH 2)C.G.S.X.
0.411e-98361Triticum aestivumTa.15729.1.S1_atCA486567--8e-1At3g53610ATRAB8C.G.S.X.
0.022e-136Vitis vinifera1615417_atCB348753--1e+0At2g45240MAP1A (METHIONINE AMINOPEPTIDASE 1A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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