CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.125.1.S1_at

Gene name nitrate reductase (NAD(P)H)

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.46 58.4 Zm.125.1.S1_at X64446.1 nitrate reductase (NAD(P)H) - 7e+0 At5g24560 AtPP2-B12 (Phloem protein 2-B12) S.X. H.G.
0.37 42.3 Zm.829.2.S1_at CD433332 Hypothetical protein LOC100193988 - 2e-49 At2g02760 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) S.X. H.G.
0.32 33.4 Zm.2424.1.A1_at BG841655 - - 5e+0 At5g52965 unknown protein S.X. H.G.
0.30 29.8 Zm.3980.1.A1_at BM382313 hypothetical protein LOC100274012 - 4e+0 At4g22740 glycine-rich protein S.X. H.G.
0.27 24.6 Zm.12042.1.A1_at BM416736 - - 1e+0 At3g58790 GAUT15 (Galacturonosyltransferase 15) S.X. H.G.
0.26 22.7 Zm.5858.1.A1_at AI649924 - - 7e+0 At1g71130 AP2 domain-containing transcription factor, putative S.X. H.G.
0.25 21.3 Zm.5588.1.A1_at AW054109 hypothetical protein LOC100216582 - 3e-2 At3g09160 RNA recognition motif (RRM)-containing protein S.X. H.G.
0.22 16.9 Zm.7667.1.A1_at CO527800 hypothetical protein LOC100191689 - 1e-7 At5g64670 ribosomal protein L15 family protein S.X. H.G.
0.21 15.5 Zm.14628.1.A1_at BM075532 - - 8e+0 At3g19790 unknown protein S.X. H.G.
0.18 11.6 Zm.5079.1.A1_at CF043421 - - 1e+1 At5g39645 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.0 99.7 GSM206304 Upper pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
24.4 99.6 GSM206310 Lower pulvinus 60 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.4 98.7 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.0 98.6 GSM206306 Lower pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
10.0 98.4 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.7 98.3 GSM206292 Upper pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.8 98.1 GSM206300 Upper pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.3 98.0 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.6 97.9 GSM206298 Lower pulvinus 60 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.1 97.7 GSM206307 Lower pulvinus 5 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
1.00 0 1846 Zm.125.1.A1_at X64446.1 nitrate reductase (NAD(P)H) - 7e+0 At5g24560 AtPP2-B12 (Phloem protein 2-B12) C.G. S.X.
0.14 3e-31 135 Zm.1826.1.A1_at AW461127 nitrate reductase - 8e-21 At1g37130 NIA2 (NITRATE REDUCTASE 2) C.G. S.X.
0.14 3e-31 135 Zm.15815.1.A1_at M27821.1 NADH:nitrate reductase - 1e-21 At1g37130 NIA2 (NITRATE REDUCTASE 2) C.G. S.X.
0.19 3e-31 135 Zm.15815.1.S1_at M27821.1 NADH:nitrate reductase - 1e-21 At1g37130 NIA2 (NITRATE REDUCTASE 2) C.G. S.X.
0.02 2e-1 36 Zm.13356.1.S1_at AY105810.1 - - 2e-7 At3g20320 TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2) C.G. S.X.
0.02 2e-1 36 Zm.10172.1.A1_at CO532781 hypothetical protein LOC100273092 - 2e-1 At1g01720 ATAF1 C.G. S.X.
0.01 8e-1 34 Zm.16923.1.A1_at AI374569 hypothetical protein LOC100193833 - 7e-36 At2g34430 LHB1B1 C.G. S.X.
0.02 8e-1 34 Zm.17158.1.A1_at CF636674 - - 5e+0 At5g01600 ATFER1 C.G. S.X.
0.01 8e-1 34 Zm.13164.1.A1_at CD437268 - - 8e-1 At1g22380 AtUGT85A3 (UDP-glucosyl transferase 85A3) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e+0 32 Arabidopsis thaliana At5g24560 832527 AtPP2-B12 (Phloem protein 2-B12) F:carbohydrate binding;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 3e+0 34 Glycine max PsAffx.psZS005xC05f_at PsAffx.psZS005xC05f - - 2e-2 At1g02405 proline-rich family protein C.G. S.X.
0.26 1e-76 286 Hordeum vulgare Contig13776_at Contig13776 - - 4e-10 At1g77760 NIA1 (NITRATE REDUCTASE 1) C.G. S.X.
0.28 6e-85 315 Oryza sativa Os02g0770800 AK102178.1 - Nitrate reductase [NAD(P)H] (EC 1.7.1.2) 5e-16 At1g77760 NIA1 (NITRATE REDUCTASE 1) C.G. S.X.
0.04 3e+0 34 Populus trichocarpa PtpAffx.223075.1.S1_at pmrna40880 hypothetical protein - 6e+0 At2g19690 PLA2-BETA (PHOSPHOLIPASE A2-BETA) C.G. S.X.
0.20 6e-22 105 Triticum aestivum TaAffx.59243.1.S1_at CA605457 - - 4e+0 At5g08040 TOM5 (MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG) C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1620594_at CB341441 - - 1e+1 Atmg00990 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage