Gene omics information

Query gene ID Zm.12459.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8395.6Zm.12459.1.A1_atBE186592--9e-6At3g44600CYP71 (CYCLOPHILIN71)S.X.H.G.
0.6785.8Zm.17287.1.A1_atCK144321--5e+0At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)S.X.H.G.
0.6077.8Zm.10900.1.A1_atBM332136--1e-3At1g20830unknown proteinS.X.H.G.
0.2318.6Zm.10652.1.S1_atCN844569hypothetical protein LOC100191856-4e-2At1g23040hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.147.7Zm.8576.1.A1_atBM074724caffeic acid 3-O-methyltransferase-4e-2At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)S.X.H.G.
0.125.9Zm.4257.1.S1_atAW076388respiratory burst oxidase protein A-5e-12At1g64060ATRBOH F (ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE PROTEIN F)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.598.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.198.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.098.4GSM290554WS2 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
9.598.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.997.9GSM290553WS1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)
7.797.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.397.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.697.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.597.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.097.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.051e-1273Zm.6088.1.A1_atBM338924mitochondrial glycoprotein-1e-2At5g05990mitochondrial glycoprotein family protein / MAM33 family proteinC.G.S.X.
0.122e-1169Zm.8547.1.A1_atBM338859--5e+0At3g09380-C.G.S.X.
0.082e-756Zm.16008.1.S1_atCF972563--1e-5At3g49350RAB GTPase activatorC.G.S.X.
0.054e-652Zm.6731.1.A1_atAI395998hypothetical protein LOC100279494-1e-14At1g50670OTU-like cysteine protease family proteinC.G.S.X.
0.062e-446Zm.923.1.S1_atBE519352--2e+0At1g35230AGP5 (ARABINOGALACTAN-PROTEIN 5)C.G.S.X.
0.074e-342Zm.3358.1.A1_atAI947857--7e+0At4g02970AT7SL-1 (Arabidopsis 7SL RNA 1)C.G.S.X.
0.036e-238Zm.1567.1.S1_atBG840795--2e+0At2g40085unknown proteinC.G.S.X.
0.029e-134Zm.6755.1.A1_a_atCF629886nicotiana lesion-inducing like-2e+0At2g12945unknown proteinC.G.S.X.
0.029e-134Zm.6755.1.A1_atCF629886nicotiana lesion-inducing like-2e+0At2g12945unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.119e-652Arabidopsis thalianaAt3g44600823585CYP71 (CYCLOPHILIN71)Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3.---C.G.S.X.
0.093e-654Glycine maxGmaAffx.448.2.S1_atBM524608--2e-27At3g44600CYP71 (CYCLOPHILIN71)C.G.S.X.
0.342e-85315Hordeum vulgareContig16607_atContig16607--7e-21At3g44600CYP71 (CYCLOPHILIN71)C.G.S.X.
0.183e-87323Oryza sativaOs08g0557500AK111654.1-Peptidyl-prolyl cis-trans isomerase B precursor(EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin B)2e-30At3g44600CYP71 (CYCLOPHILIN71)C.G.S.X.
0.131e-1481Populus trichocarpaPtp.6703.1.S1_atCV256316hypothetical protein-3e-10At3g44600CYP71 (CYCLOPHILIN71)C.G.S.X.
0.201e-69264Triticum aestivumTa.4166.2.A1_atBJ265813--5e-9At3g44600CYP71 (CYCLOPHILIN71)C.G.S.X.
0.022e+032Vitis vinifera1606987_atCF405059hypothetical protein LOC100260919-1e+0At2g31750UGT74D1 (UDP-glucosyl transferase 74D1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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