Gene omics information

Query gene ID	Zm.12358.1.S1_at
Gene name	hypothetical protein LOC100274476
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.83	95.6	Zm.12358.1.S1_at	CO534920	hypothetical protein LOC100274476	-	1e+0	At3g01050	MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR)	S.X.	H.G.	Please select
0.60	77.8	Zm.12345.1.A1_at	BM416967	mediator complex subunit 10 CG5057-PA	-	2e-3	At1g26665	-	S.X.	H.G.	Please select
0.48	61.3	Zm.7756.1.A1_at	BQ538566	hypothetical protein LOC100279912	-	1e+0	At1g28140	unknown protein	S.X.	H.G.	Please select
0.44	55.7	Zm.9708.1.A1_at	BQ538651	DNA binding protein	-	4e-1	At4g16160	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	S.X.	H.G.	Please select
0.44	55.7	Zm.2583.1.S1_at	CN845475	ATP/GTP binding protein	-	8e+0	At3g23240	ERF1 (ETHYLENE RESPONSE FACTOR 1)	S.X.	H.G.	Please select
0.42	51.3	Zm.7776.1.A1_at	BM331974	hypothetical protein LOC100193214	-	7e-3	At3g49550	unknown protein	S.X.	H.G.	Please select
0.39	45.6	Zm.18983.1.A1_at	AI795441	L-allo-threonine aldolase	-	9e-10	At1g08630	THA1 (Threonine Aldolase 1)	S.X.	H.G.	Please select
0.37	42.3	Zm.2010.1.S1_at	AW563146	-	-	4e+0	At1g26355	SP1L1 (SPIRAL1-LIKE1)	S.X.	H.G.	Please select
0.36	41.3	Zm.6325.1.A1_at	CF625024	snRK1-interacting protein 1	-	6e+0	At5g24355	unknown protein	S.X.	H.G.	Please select
0.35	38.9	Zm.879.1.A1_at	BM379556	hypothetical protein LOC100276616	-	7e+0	At5g35300	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
26.8	99.7	GSM206304	Upper pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
19.6	99.3	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
17.8	99.1	GSM206292	Upper pulvinus 60 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
16.0	99.0	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
13.1	98.7	GSM206305	Right pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
11.4	98.5	GSM206298	Lower pulvinus 60 min total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
11.1	98.5	GSM206293	Right pulvinus control total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
10.8	98.5	GSM206299	Left pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.8	98.3	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
9.6	98.3	GSM206300	Upper pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-3	40	Zm.9953.1.S1_at	BM349903	-	-	4e+0	At5g55507	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select
0.01	3e-2	38	Zm.4726.1.S1_at	AY109136.1	histidinol dehydrogenase	-	1e-64	At5g63890	ATHDH (HISTIDINOL DEHYDROGENASE)	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.3644.1.S1_at	CO525387	hypothetical protein AY111178 /// hypothetical protein LOC100191318 /// hypothetical protein LOC100217011	-	8e-1	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.283.1.S1_at	AY254104.1	benzoxazinless1	-	5e-2	At4g01220	-	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.18018.1.A1_at	CF637656	18.3 kDa class I heat shock protein	-	1e-1	At1g59860	17.6 kDa class I heat shock protein (HSP17.6A-CI)	C.G.	S.X.	Please select
0.03	1e-1	36	Zm.17949.1.A1_at	CF627845	-	-	2e-2	At5g13170	SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29)	C.G.	S.X.	Please select
0.02	1e-1	36	Zm.17181.1.S1_at	CK145306	-	-	7e-17	At1g64660	ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)	C.G.	S.X.	Please select
0.04	1e-1	36	Zm.10850.1.A1_at	AY106263.1	-	-	8e-1	At5g40420	OLEO2 (OLEOSIN 2)	C.G.	S.X.	Please select
0.04	1e-1	36	Zm.10850.1.S1_at	AY106263.1	ZIM motif family protein	-	8e-1	At5g40420	OLEO2 (OLEOSIN 2)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e+0	34	Arabidopsis thaliana	At3g01050	821307	MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR)	F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	4e-1	36	Glycine max	GmaAffx.63549.1.S1_at	BG352298	-	-	3e-2	At3g19130	ATRBP47B (RNA-binding protein 47B)	C.G.	S.X.	Please select
0.19	5e-23	107	Hordeum vulgare	Contig15718_at	Contig15718	-	-	2e+0	At3g17609	HYH (HY5-HOMOLOG)	C.G.	S.X.	Please select
0.11	7e-22	105	Oryza sativa	Os06g0677000	9634.m04507	-	Patatin family protein	2e+0	At5g22880	HTB2	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.217675.1.S1_at	pmrna33035	hypothetical protein	-	8e+0	Atmg00285	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.24	1e-22	107	Triticum aestivum	Ta.7067.1.S1_x_at	BQ801766	-	-	1e+0	At3g17609	HYH (HY5-HOMOLOG)	C.G.	S.X.	Please select
0.03	5e+0	30	Vitis vinifera	1619258_at	CF517798	hypothetical protein LOC100255734	-	6e+0	At5g63480	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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