Gene omics information

Query gene ID	Zm.12345.1.A1_at
Gene name	mediator complex subunit 10 CG5057-PA
Organism	Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.77	92.1	Zm.12345.1.A1_at	BM416967	mediator complex subunit 10 CG5057-PA	-	2e-3	At1g26665	-	S.X.	H.G.	Please select
0.83	95.6	Zm.7756.1.A1_at	BQ538566	hypothetical protein LOC100279912	-	1e+0	At1g28140	unknown protein	S.X.	H.G.	Please select
0.77	92.1	Zm.18983.1.A1_at	AI795441	L-allo-threonine aldolase	-	9e-10	At1g08630	THA1 (Threonine Aldolase 1)	S.X.	H.G.	Please select
0.60	77.8	Zm.7779.1.A1_at	CF630385	3-hydroxybutyryl-CoA dehydratase	-	4e-8	At4g16210	ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)	S.X.	H.G.	Please select
0.57	75.1	Zm.6325.1.A1_at	CF625024	snRK1-interacting protein 1	-	6e+0	At5g24355	unknown protein	S.X.	H.G.	Please select
0.50	65.7	Zm.2583.1.S1_at	CN845475	ATP/GTP binding protein	-	8e+0	At3g23240	ERF1 (ETHYLENE RESPONSE FACTOR 1)	S.X.	H.G.	Please select
0.46	58.4	Zm.7776.1.A1_at	BM331974	hypothetical protein LOC100193214	-	7e-3	At3g49550	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.2	96.9	GSM206305	Right pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.7	96.5	GSM206299	Left pulvinus control polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
4.4	96.2	GSM253280	ZM_8d_SG200_3Alu_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.7	95.4	GSM253281	ZM_8d_SG200_3Alu_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.7	95.4	GSM206307	Lower pulvinus 5 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.4	94.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM206293	Right pulvinus control total RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
3.1	94.3	GSM253282	ZM_8d_SG200_3Alu_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.0	94.0	GSM206306	Lower pulvinus 2 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus
2.9	93.8	GSM320445	protocol: mRNA - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.90	0	1269	Zm.12345.1.A1_a_at	BM416967	mediator complex subunit 10 CG5057-PA	-	2e-3	At1g26665	-	C.G.	S.X.	Please select
0.23	3e-71	268	Zm.12345.2.A1_at	AY111982.1	-	-	4e+0	At5g08050	-	C.G.	S.X.	Please select
0.23	3e-71	268	Zm.12345.2.S1_at	AY111982.1	-	-	4e+0	At5g08050	-	C.G.	S.X.	Please select
0.02	7e-1	34	Zm.9283.1.A1_at	BM267774	-	-	1e+0	At2g20930	-	C.G.	S.X.	Please select
0.01	7e-1	34	Zm.663.1.S1_at	AF318075.1	cis-zeatin O-glucosyltransferase1	-	7e-1	At5g59580	UGT76E1 (UDP-GLUCOSYL TRANSFERASE 76E1)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.7914.1.A1_at	AY103800.1	hypothetical protein LOC100277669	-	5e-11	At3g21175	ZML1 (ZIM-LIKE 1)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.7914.1.A1_a_at	AY103800.1	hypothetical protein LOC100277669	-	5e-11	At3g21175	ZML1 (ZIM-LIKE 1)	C.G.	S.X.	Please select
0.01	3e+0	32	Zm.7343.1.S1_at	AF371278.1	alpha globulin	-	6e-1	At5g05230	ubiquitin-protein ligase	C.G.	S.X.	Please select
0.02	3e+0	32	Zm.7351.1.A1_at	BM080047	50S ribosomal protein L10	-	4e-1	At3g12370	ribosomal protein L10 family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.12	2e-3	44	Arabidopsis thaliana	At1g26665	839207	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	2e-6	54	Glycine max	Gma.4604.1.S1_at	CA802306	-	-	3e-47	At4g14710	acireductone dioxygenase [iron(II)-requiring]/ metal ion binding	C.G.	S.X.	Please select
0.39	3e-133	474	Hordeum vulgare	Contig8868_at	Contig8868	-	-	4e-8	At5g41910	RNA polymerase II mediator complex protein-related	C.G.	S.X.	Please select
0.21	7e-134	478	Oryza sativa	Os09g0528300	AK121125.1	-	Conserved hypothetical protein	1e-1	At1g26665	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.29	3e-15	83	Populus trichocarpa	Ptp.59.1.S1_at	CA932099	hypothetical protein	-	2e-15	At5g41910	RNA polymerase II mediator complex protein-related	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.56	4e-146	517	Triticum aestivum	Ta.14547.3.A1_x_at	BJ273621	-	-	2e-5	At5g41910	RNA polymerase II mediator complex protein-related	C.G.	S.X.	Please select
0.30	4e-20	97	Vitis vinifera	1612815_at	CB972191	hypothetical protein LOC100263293	-	4e-17	At5g41910	RNA polymerase II mediator complex protein-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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