Gene omics information

Query gene ID Zm.12317.1.S1_at
Gene name ethylene-responsive transcription factor 4
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8495.8Zm.12317.1.S1_atAY106969.1ethylene-responsive transcription factor 4-2e-12At5g44210ERF9 (ERF DOMAIN PROTEIN 9)S.X.H.G.
0.5166.4Zm.8421.1.A1_atBM340353hypothetical protein LOC100216763-7e+0At3g12300unknown proteinS.X.H.G.
0.4048.5Zm.6630.2.S1_atCD447067hypothetical protein LOC100193888-3e-2At1g15750TPL (TOPLESS)S.X.H.G.
0.3945.6Zm.17282.1.S1_atCK369877--1e+1At5g32597unknown proteinS.X.H.G.
0.3742.3Zm.3118.1.S1_atAY103914.1hypothetical protein LOC100274547-9e-3At2g3722029 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putativeS.X.H.G.
0.3742.3Zm.6631.1.A1_atAY108443.1hypothetical protein LOC100191632-1e-2At5g11100SYTDS.X.H.G.
0.3742.3Zm.12304.1.A1_atCF637007hypothetical protein LOC100274389-2e+0At1g64720CP5S.X.H.G.
0.3641.3Zm.4839.1.S1_atAY103614.1aldehyde dehydrogenase family 7 member A1-6e-33At1g54100ALDH7B4 (Aldehyde Dehydrogenase 7B4)S.X.H.G.
0.3641.3Zm.2715.1.A1_atAW066985--5e+0At4g12990unknown proteinS.X.H.G.
0.3437.2Zm.13514.2.S1_a_atAY108547.1phytoene synthase 2-2e-6At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.499.0GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
13.298.8GSM206314Upper pulvinus 15 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
11.398.5GSM206326Upper pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
10.698.4GSM162266Wild type 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
9.598.3GSM206320Lower pulvinus 15 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
9.098.2GSM206302Upper pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
7.697.9GSM206308Lower pulvinus 15 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
7.397.8GSM162265Wild type 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
7.197.7GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maize
6.697.6GSM206290Upper pulvinus 15 min total RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.123e-44178Zm.19143.1.A1_atCF626055--1e-11At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.154e-34145Zm.18520.1.A1_atCF632042--8e-3At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.037e-1167Zm.13383.1.S1_atAY178191.1branched silkless1-1e-2At1g53170ERF8C.G.S.X.
0.113e-1065Zm.8626.1.A1_atBM348921hypothetical protein LOC100274398-1e+0At5g61600ethylene-responsive element-binding family proteinC.G.S.X.
0.113e-756Zm.17956.1.A1_atCF637428--2e+0At3g20570plastocyanin-like domain-containing proteinC.G.S.X.
0.044e-652Zm.13842.1.A1_atAY104042.1--1e-1At1g06160ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59)C.G.S.X.
0.094e-652Zm.11441.1.S1_atAY672654.1ethylene-responsive factor-like protein 1-2e+0At3g14230RAP2.2C.G.S.X.
0.032e-550Zm.7765.1.A1_atBQ539662--3e-1At1g53170ERF8C.G.S.X.
0.046e-548Zm.7459.1.A1_atAY105544.1Hypothetical protein LOC100193143-6e-1At2g44790UCC2 (UCLACYANIN 2)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.102e-1273Arabidopsis thalianaAt5g44210834444ERF9 (ERF DOMAIN PROTEIN 9)encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.---C.G.S.X.
0.174e-1583Glycine maxGma.16480.2.S1_atAI900301--3e-22At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.427e-79293Hordeum vulgareContig6636_atContig6636--4e-11At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.362e-67258Oryza sativaOs05g0497300AK111755.1-Ethylene responsive element binding factor 5(AtERF5)4e-14At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
0.112e-757Populus trichocarpaPtpAffx.22849.1.S1_atCV240381AP2/ERF domain-containing transcription factor-1e-14At5g44210ERF9 (ERF DOMAIN PROTEIN 9)C.G.S.X.
0.267e-1685Triticum aestivumTa.5369.1.A1_s_atCK207603ethylene-responsive factor-like transcription factor ERFL2a-5e+0At4g09590NHL22C.G.S.X.
0.203e-1891Vitis vinifera1611910_s_atAY395745.1similar to putative ethylene response factor ERF3b-9e-14At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage