Gene omics information

Query gene ID Zm.12263.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6785.8Zm.12263.1.S1_atBQ528944--4e+0At5g16110unknown proteinS.X.H.G.
0.3131.6Zm.1356.2.S1_a_atCF014499metallothionein-like protein type 2-7e-3At3g09390MT2A (METALLOTHIONEIN 2A)S.X.H.G.
0.1912.8Zm.18060.1.A1_atCK985812--2e+0At4g07515unknown proteinS.X.H.G.
0.1710.6Zm.8514.1.A1_atAY104758.1PREG-like protein-5e+0At5g35525unknown proteinS.X.H.G.
0.158.6Zm.11725.1.A1_atBM380225--3e+0At4g05430-S.X.H.G.
0.136.8Zm.7512.2.A1_a_atAI691598hypothetical protein LOC100276101-4e-1At5g08590SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.799.6GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.299.3GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.599.0GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.599.0GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.499.0GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.599.0GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.599.0GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.098.9GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.998.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.898.8GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.432e-40165Zm.9681.1.A1_atBM339116--5e+0At4g29735unknown proteinC.G.S.X.
0.471e-2099Zm.10980.1.A1_atBM334102--4e+0At3g27416unknown proteinC.G.S.X.
0.226e-1993Zm.5514.1.A1_atAI622393hypothetical protein LOC100194003-2e+0Atcg00440-C.G.S.X.
0.131e-1375Zm.17356.1.A1_atCF634567Hypothetical protein LOC100193821-1e-1At5g19480unknown proteinC.G.S.X.
0.186e-1373ZmAffx.462.1.A1_atAI677305--3e+0At4g22870leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putativeC.G.S.X.
0.096e-1373ZmAffx.462.1.S1_atAI677305--3e+0At4g22870leucoanthocyanidin dioxygenase, putative / anthocyanidin synthase, putativeC.G.S.X.
0.101e-446Zm.1784.1.S1_atBF728627hypothetical protein LOC100277524-9e-1At1g10710-C.G.S.X.
0.055e-444Zm.5576.1.A1_atAI622800hypothetical protein LOC100279702-2e-1At3g30200-C.G.S.X.
0.135e-444Zm.13276.1.S1_atCA826879--2e+1At5g04520unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e+032Arabidopsis thalianaAt5g16110831468unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;P---C.G.S.X.
0.046e+032Glycine maxGmaAffx.45432.1.S1_atBG650794--6e-1At2g29525-C.G.S.X.
0.038e+030Hordeum vulgareContig15677_atContig15677--2e-1At1g52280AtRABG3d (Arabidopsis Rab GTPase homolog G3d)C.G.S.X.
0.049e+032Oryza sativaOsAffx.16271.1.S1_at---0C.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.82251.1.A1_atCV254511hypothetical protein-1e-3At4g33060peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinC.G.S.X.
0.035e+032Triticum aestivumTa.97.1.S1_atM94959.1--4e+0At5g67350unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1616400_s_atCF206159.1hypothetical protein LOC100266723-4e-12At4g23100GSH1 (GLUTAMATE-CYSTEINE LIGASE)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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