Gene omics information

Query gene ID Zm.12050.1.A1_at
Gene name early flowering 4
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6179.5Zm.12050.1.A1_atBM416823early flowering 4-1e+0At5g16030unknown proteinS.X.H.G.
0.6179.5Zm.3892.5.A1_atBM07963460S ribosomal protein L28-6e-7At2g1973060S ribosomal protein L28 (RPL28A)S.X.H.G.
0.5065.7Zm.14068.1.S1_atAI920492vacuolar protein-sorting protein 45-2e-23At1g77140VPS45 (VACUOLAR PROTEIN SORTING 45)S.X.H.G.
0.4658.4Zm.1829.1.S1_atAY103809.1--3e+0At5g17710EMB1241 (embryo defective 1241)S.X.H.G.
0.4251.3ZmAffx.521.1.A1_atAI711634hypothetical protein LOC100193955-3e+0At5g27880zinc finger (C2H2 type) family proteinS.X.H.G.
0.3844.2Zm.18531.1.A1_atBE575145hypothetical protein LOC100192889-2e+0At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)S.X.H.G.
0.3437.2Zm.5253.1.S1_atBM08061960S ribosomal protein L34-5e-19At3g2890060S ribosomal protein L34 (RPL34C)S.X.H.G.
0.3336.0Zm.4084.1.A1_atCK145425CONSTANS interacting protein 6-8e-1At5g28800unknown proteinS.X.H.G.
0.3131.6Zm.10798.1.A1_atCF003582Hypothetical protein LOC100191405-1e-2At1g26930kelch repeat-containing F-box family proteinS.X.H.G.
0.3029.8Zm.4682.1.S1_atAI737946acyl-desaturase-1e-1At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.498.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.398.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.798.3GSM202290Mo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
8.698.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.298.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.198.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.297.8GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
7.297.8GSM202303Mo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
6.797.6GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
6.597.5GSM253278ZM_8d_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.725e-140496Zm.7760.1.A1_s_atBM080238hypothetical protein LOC100279754 /// early flowering 4-1e+0At5g16030unknown proteinC.G.S.X.
0.137e-25113Zm.1247.1.S1_atBE575051EARLY flowering 4 protein-4e+0At3g17570F-box family proteinC.G.S.X.
0.016e-444Zm.41.1.S1_atAI600908calcium dependent protein kinase1-1e-16At2g46700calcium-dependent protein kinase, putative / CDPK, putativeC.G.S.X.
0.013e-238Zm.14573.1.S1_atCO527252glucan endo-1,3-beta-glucosidase 7-9e-1At3g46570glycosyl hydrolase family 17 proteinC.G.S.X.
0.041e-136Zm.6779.2.S1_a_atAY107207.1--3e+0At4g21460unknown proteinC.G.S.X.
0.041e-136Zm.6779.2.S1_s_atAY107207.1hypothetical protein LOC100275106-3e+0At4g21460unknown proteinC.G.S.X.
0.011e-136Zm.6779.1.S1_atCA405303hypothetical protein LOC100273623-1e+0At4g09250-C.G.S.X.
0.031e-136Zm.6195.1.A1_atAI668513hypothetical protein LOC100275106-4e+0At4g17790-C.G.S.X.
0.031e-136Zm.6195.1.A1_x_atAI668513hypothetical protein LOC100275106-4e+0At4g17790-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e+034Arabidopsis thalianaAt5g16030831460unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBA---C.G.S.X.
0.043e-240Glycine maxGma.2126.1.S1_atCD413692--7e-9At1g72630ELF4-L2 (ELF4-Like 2)C.G.S.X.
0.133e-1891Hordeum vulgareContig11576_atContig11576--4e-1At3g58150-C.G.S.X.
0.212e-59230Oryza sativaOs03g0410300AK071843.1-Protein of unknown function DUF1313 family protein1e-4At1g72630ELF4-L2 (ELF4-Like 2)C.G.S.X.
0.043e-240Populus trichocarpaPtpAffx.200114.1.S1_atpmrna210hypothetical protein-2e-1At1g28040protein binding / zinc ion bindingC.G.S.X.
0.247e-67254Triticum aestivumTaAffx.26983.1.S1_atCK161831--1e-2At1g49770RGE1 (RETARDED GROWTH OF EMBRYO 1)C.G.S.X.
0.042e-342Vitis vinifera1618652_atCF208532hypothetical protein LOC100266924-2e-9At2g06255ELF4-L3 (ELF4-Like 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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