Gene omics information

Query gene ID Zm.1204.1.S1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.9Zm.1204.1.S1_atBE519063--2e-2At1g10580transducin family protein / WD-40 repeat family proteinS.X.H.G.
0.3233.4Zm.9908.1.A1_atCF054801hypothetical protein LOC100277932-1e-37At1g22840CYTC-1 (CYTOCHROME C-1)S.X.H.G.
0.3131.6Zm.14039.3.S1_a_atAF113521.1plasminogen activator inhibitor 1 RNA-binding protein-2e-3At4g16830nuclear RNA-binding protein (RGGA)S.X.H.G.
0.2724.6Zm.7973.1.S1_atAY104213.1hypothetical protein LOC100273340-8e-9At2g35120glycine cleavage system H protein, mitochondrial, putativeS.X.H.G.
0.2622.7Zm.4227.1.A1_atCF625229TBC domain containing protein-3e-12At5g54780RAB GTPase activatorS.X.H.G.
0.2318.6Zm.8866.1.A1_atBM348347expansin-like 3-1e-2At4g38400ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)S.X.H.G.
0.1912.8Zm.10817.1.S1_x_atAF371275.122kD alpha zein3-3e-3At4g32930unknown proteinS.X.H.G.
0.1811.6Zm.14301.1.S1_atAI712237hypothetical protein LOC100192964-2e-22At3g61620RRP41S.X.H.G.
0.1811.6Zm.224.1.S1_atY17898.1outer cell layer1-1e-7At4g00730ANL2 (ANTHOCYANINLESS 2)S.X.H.G.
0.1710.6Zm.5787.2.S1_atAY107157.1hypothetical protein LOC100273050-4e-1At5g48790unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
45.8100.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
37.199.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
32.499.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
24.799.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
23.299.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.499.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.798.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.298.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.898.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.195.9GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.061e-446Zm.2717.1.A1_atCK347342--6e-6At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.023e-238Zm.383.1.S1_s_atAF023165.1leucine-rich repeat transmembrane protein kinase 2-1e-22At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.023e-238Zm.382.2.A1_atAY109511.1Leucine-rich repeat transmembrane protein kinase 2-1e-22At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.023e-238Zm.382.1.S1_atCF020226leucine-rich transmembrane protein kinase1-4e-16At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.031e-136Zm.18035.1.A1_atCK985665hypothetical protein LOC100279473-7e+0At4g23271unknown proteinC.G.S.X.
0.045e-134Zm.11800.2.A1_atBM380848hypothetical protein LOC100191350-3e+0At2g05840PAA2 (20S PROTEASOME SUBUNIT PAA2)C.G.S.X.
0.022e+032Zm.6342.1.S1_atAW052791--2e-13At1g52540protein kinase, putativeC.G.S.X.
0.022e+032Zm.17545.1.A1_atBM350102hypothetical protein LOC100273664-1e-1At1g67856protein binding / zinc ion bindingC.G.S.X.
0.032e+032Zm.16829.3.A1_atAY111089.1--4e+0At5g55240caleosin-related family protein / embryo-specific protein, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-240Arabidopsis thalianaAt1g10580837599transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAV---C.G.S.X.
0.132e-344Glycine maxGmaAffx.93315.1.S1_atCF809040--1e-22At1g10580transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.107e-56216Hordeum vulgareContig9484_atContig9484--7e-79At1g10580transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.103e-58226Oryza sativaOs03g0397500AK073478.1-G-protein beta WD-40 repeat containing protein6e-61At1g10580transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.094e-136Populus trichocarpaPtpAffx.835.1.S1_atCV130820hypothetical protein-4e-140At1g10580transducin family protein / WD-40 repeat family proteinC.G.S.X.
0.092e-1479Triticum aestivumTa.28744.3.S1_a_atBJ263065--2e-26At5g60390elongation factor 1-alpha / EF-1-alphaC.G.S.X.
0.051e-342Vitis vinifera1611562_atCF211645hypothetical protein LOC100247008-2e-1At4g03390SRF3 (STRUBBELIG-RECEPTOR FAMILY 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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