Gene omics information

Query gene ID Zm.12021.1.A1_at
Gene name hypothetical protein LOC100273474
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4658.4Zm.12021.1.A1_atBM382722hypothetical protein LOC100273474-4e+0At5g10140FLC (FLOWERING LOCUS C)S.X.H.G.
0.4658.4Zm.5565.1.S1_atD45402.1cysteine protease1-9e-11At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)S.X.H.G.
0.3538.9Zm.9236.1.A1_atBM339258--8e-2At3g01860unknown proteinS.X.H.G.
0.3131.6Zm.14307.1.S1_atBQ486034adenylate kinase-2e-1At2g39270adenylate kinase family proteinS.X.H.G.
0.2622.7Zm.5362.1.A1_atAW498436hypothetical protein LOC100193109-1e-1At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)S.X.H.G.
0.2521.3Zm.6142.1.A1_atAY105151.1annexin p33-2e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
28.899.7GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydis
24.399.6GSM320445protocol: mRNA - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.799.4GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.599.3GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydis
18.699.2GSM320446protocol: mRNA - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.998.9GSM253269ZM_4.5d_Mock_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydis
8.698.1GSM320439protocol: mRNA - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.398.0GSM320438protocol: mRNA - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.397.8GSM320440protocol: mRNA - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.897.6GSM202402Zmet2 study 11-day seedling aerial tissue genotype Mo17 Rep1GSE8188Expression profiling of zmet2-m1 mutants relative to wild-type
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-238Zm.8822.2.A1_atBM331999xylanase inhibitor protein 1-6e+0At5g56480protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.013e-238Zm.8822.1.A1_atAY105347.1glycerol-3-phosphate acyltransferase 8-3e-19At2g38110GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)C.G.S.X.
0.023e-238Zm.13961.1.S1_atAY540745.1hydroperoxide lyase-4e+0At2g05440glycine-rich proteinC.G.S.X.
0.023e-238Zm.13383.1.S1_atAY178191.1branched silkless1-1e-2At1g53170ERF8C.G.S.X.
0.041e-136ZmAffx.1116.1.S1_atAI670638--5e+0At5g55570unknown proteinC.G.S.X.
0.041e-136ZmAffx.1116.1.A1_atAI670638--5e+0At5g55570unknown proteinC.G.S.X.
0.021e-136Zm.704.1.S1_atU15781.1xyloglucan endotransglycosylase homolog1-3e-6At5g57550XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)C.G.S.X.
0.031e-136Zm.6349.1.A1_atCA830981hypothetical protein LOC100277279-1e-7At1g46264AT-HSFB4C.G.S.X.
0.021e-136Zm.6107.1.A1_atAY488135.1allene oxide synthase-4e+0At5g52480-C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e+032Arabidopsis thalianaAt5g10140830878FLC (FLOWERING LOCUS C)MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3’ to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.---C.G.S.X.
0.044e-136Glycine maxHgAffx.7168.1.S1_atCB825043--5e+0At5g51812unknown proteinC.G.S.X.
0.525e-75280Hordeum vulgareContig9767_atContig9767--3e+0At3g04180germin-like protein, putativeC.G.S.X.
0.403e-89329Oryza sativaOs10g0330400AK099421.1-Protein of unknown function DUF179 family protein6e-1At1g04445zinc finger (C2H2 type) family proteinC.G.S.X.
0.041e-138Populus trichocarpaPtpAffx.220325.1.S1_atpmrna36696hypothetical protein-1e+1At5g48550F-box family protein-relatedC.G.S.X.
0.381e-65250Triticum aestivumTa.22573.1.S1_atCA632756--2e+0At3g29034unknown proteinC.G.S.X.
0.048e-236Vitis vinifera1617243_atCB343510--1e+0At5g54855pollen Ole e 1 allergen and extensin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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