Gene omics information

Query gene ID Zm.11939.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.8Zm.11939.1.A1_atCF624620--7e-21At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)S.X.H.G.
0.3131.6Zm.9219.1.A1_a_atBM350438hypothetical protein LOC100275751-3e-1At1g77340pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.2521.3Zm.2190.1.A1_atBG841211hypothetical protein LOC100276270-6e+0At5g05930guanylyl cyclase-related (GC1)S.X.H.G.
0.2216.9Zm.18077.1.S1_atCO530287hypothetical protein LOC100193986-4e-8At1g08570ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4)S.X.H.G.
0.158.6Zm.17794.1.S1_atCK371286hypothetical protein LOC100274149-6e-6At4g18230-S.X.H.G.
0.094.0Zm.3373.1.A1_atCK827225--1e+1At5g23740RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)S.X.H.G.
0.051.9Zm.19167.2.A1_x_atCF636656Hypothetical protein LOC100194096-9e+0At4g13160unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.098.6GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
10.198.4GSM206313Upper pulvinus 5 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
7.297.8GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
7.197.7GSM206301Upper pulvinus 5 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.997.3GSM206319Lower pulvinus 5 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.797.2GSM206321Lower pulvinus 30 min total RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.697.1GSM206331Lower pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.597.1GSM206326Upper pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.096.7GSM206327Upper pulvinus 30 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
5.096.7GSM206330Lower pulvinus 2 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.206e-81299Zm.382.1.S1_atCF020226leucine-rich transmembrane protein kinase1-4e-16At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.202e-68258Zm.383.1.S1_s_atAF023165.1leucine-rich repeat transmembrane protein kinase 2-1e-22At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.202e-68258Zm.382.2.A1_atAY109511.1Leucine-rich repeat transmembrane protein kinase 2-1e-22At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.362e-22105Zm.2717.1.A1_atCK347342--6e-6At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.022e-446Zm.2367.1.S1_atAW497505Pti1 protein-5e-30At3g62220serine/threonine protein kinase, putativeC.G.S.X.
0.029e-340Zm.5895.1.A1_atBM073861hypothetical protein LOC100193058-8e-7At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinC.G.S.X.
0.039e-340Zm.4560.1.S1_atAI734791Pti1-like kinase-like-3e-47At3g59350serine/threonine protein kinase, putativeC.G.S.X.
0.034e-238Zm.10753.1.A1_atBQ539394BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-2e-2At3g15890protein kinase family proteinC.G.S.X.
0.021e-136Zm.721.1.A1_atBM267834Salt-inducible putative protein serine/threonine/tyrosine kinase-1e-33At1g06700serine/threonine protein kinase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.107e-21101Arabidopsis thalianaAt3g14350820655SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cytosol, nucleus, plasma membrane;MPOBFVA---C.G.S.X.
0.191e-1067Glycine maxGmaAffx.36693.1.S1_atBG881453--2e-70At4g22130SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)C.G.S.X.
0.336e-29127Hordeum vulgareHVSMEl0009B19r2_s_atHVSMEl0009B19r2--1e+0At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)C.G.S.X.
0.277e-118424Oryza sativaOs10g0389800NM_196278.1-Protein kinase domain containing protein2e-8At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.291e-38161Populus trichocarpaPtp.2221.1.A1_atCV231780hypothetical protein-9e-40At1g53730SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)C.G.S.X.
0.303e-51202Triticum aestivumTa.29363.1.S1_atBJ263473--2e-6At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
0.401e-38159Vitis vinifera1619614_atCF372273hypothetical protein LOC100249831-2e-36At3g14350SRF7 (STRUBBELIG-RECEPTOR FAMILY 7)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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