CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.11882.2.A1_x_at

Gene name hypothetical protein LOC100191811

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Zm.11882.2.A1_x_at BM381514 hypothetical protein LOC100191811 - 1e+0 At5g51010 rubredoxin family protein S.X. H.G.
0.56 74.4 Zm.3054.1.S1_at BU493611 electron transfer flavoprotein beta-subunit - 9e-6 At5g43430 ETFBETA S.X. H.G.
0.51 66.4 Zm.13853.1.A1_at AF272753.1 kinesin heavy chain - 2e-19 At5g41310 kinesin motor protein-related S.X. H.G.
0.39 45.6 Zm.5990.1.S1_at AY111300.1 hypothetical protein LOC100279510 - 2e-6 At5g49980 AFB5 (Auxin F-Box protein 5) S.X. H.G.
0.39 45.6 Zm.9991.1.S1_at BQ619114 hypothetical protein LOC100191513 - 7e-17 At5g09300 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative S.X. H.G.
0.36 41.3 Zm.2796.1.A1_at CF036547 hypothetical protein LOC100194185 - 4e-37 At2g40840 DPE2 (DISPROPORTIONATING ENZYME 2) S.X. H.G.
0.30 29.8 Zm.2040.1.S1_at BM338990 hypothetical protein LOC100194284 - 3e-3 At3g15355 UBC25 (UBIQUITIN-CONJUGATING ENZYME 25) S.X. H.G.
0.30 29.8 Zm.6188.2.S1_at AY108898.1 hypothetical protein LOC100194248 - 4e-2 At1g31140 agl63 (AGAMOUS-LIKE 63) S.X. H.G.
0.27 24.6 Zm.13740.1.A1_at AW330707 - - 2e-16 At2g29140 APUM3 (Arabidopsis Pumilio 3) S.X. H.G.
0.26 22.7 Zm.15457.1.S1_at CD448433 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating - 2e-13 At2g26260 AT3BETAHSD/D2 (3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.0 98.5 GSM206295 Lower pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
10.0 98.4 GSM206288 Upper pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.5 98.3 GSM206294 Lower pulvinus 2 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.5 98.1 GSM206293 Right pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
8.0 98.0 GSM206289 Upper pulvinus 5 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
7.6 97.9 GSM206290 Upper pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.6 97.6 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.2 97.4 GSM206318 Lower pulvinus 2 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
6.2 97.4 GSM206296 Lower pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
5.9 97.3 GSM206314 Upper pulvinus 15 min total RNA biorep 2 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.95 0 946 Zm.11882.2.A1_at BM381514 hypothetical protein LOC100191811 - 1e+0 At5g51010 rubredoxin family protein C.G. S.X.
0.61 0 730 Zm.11882.1.A1_x_at CK786943 hypothetical protein LOC100191811 - 2e+0 At5g51010 rubredoxin family protein C.G. S.X.
0.61 0 730 Zm.11882.1.A1_a_at CK786943 hypothetical protein LOC100191811 - 2e+0 At5g51010 rubredoxin family protein C.G. S.X.
0.28 2e-105 381 Zm.5571.1.A1_at AY111074.1 hypothetical protein LOC100194279 - 2e-1 At3g04100 AGL57 C.G. S.X.
0.02 1e-1 36 Zm.15798.1.S1_at CK370673 - - 5e-8 At1g19230 respiratory burst oxidase protein E (RbohE) / NADPH oxidase C.G. S.X.
0.02 2e+0 32 Zm.6197.1.A1_at BM380270 hypothetical protein LOC100193140 - 7e-10 At3g22110 PAC1 C.G. S.X.
0.01 2e+0 32 Zm.1869.1.S1_at BU051083 hypothetical protein LOC100274336 - 8e-5 At4g05020 NDB2 (NAD(P)H dehydrogenase B2) C.G. S.X.
0.03 7e+0 30 Zm.9852.1.A1_at BM381073 syntaxin 121 - 5e-3 At5g63740 zinc finger protein-related C.G. S.X.
0.02 7e+0 30 Zm.9031.1.S1_at CD441372 chloroplast Cu-Zn superoxide dismutase - 8e-37 At2g28190 CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At5g51010 835174 rubredoxin family protein F:electron carrier activity, metal ion binding;P:unknown;C:unknown;BPAO - - - C.G. S.X.
0.04 1e+0 34 Glycine max Gma.12475.1.S1_at CD392558 - - 2e+0 At5g25640 - C.G. S.X.
0.14 6e-22 103 Hordeum vulgare Contig6279_at Contig6279 - - 5e-2 At3g24750 unknown protein C.G. S.X.
0.14 2e-19 97 Oryza sativa Os01g0681600 AK067869.1 - - 2e-1 At1g71430 unknown protein C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.221398.1.S1_x_at pmrna38270 hypothetical protein - 2e-1 At5g25210 unknown protein C.G. S.X.
0.13 3e-16 85 Triticum aestivum Ta.14025.1.S1_at BQ802850 - - 7e-1 At5g03830 - C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1619806_at CB340138 - - 8e-1 At3g60670 zinc-binding protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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