Gene omics information

Query gene ID Zm.11868.1.A1_at
Gene name
Organism Zea mays


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8796.4Zm.11868.1.A1_atBM381367--1e+0At5g22380anac090 (Arabidopsis NAC domain containing protein 90)S.X.H.G.
0.6077.8Zm.10472.1.A1_atAY112022.1Hypothetical protein LOC100216888-3e-12At1g80780CCR4-NOT transcription complex protein, putativeS.X.H.G.
0.4861.3Zm.18512.1.A1_atCO518706hypothetical protein LOC100280076-2e+1At3g58000VQ motif-containing proteinS.X.H.G.
0.4759.9Zm.19050.1.S1_atCA829470hypothetical protein LOC100274252-5e+0At5g01880zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.4455.7Zm.1829.1.S1_atAY103809.1--3e+0At5g17710EMB1241 (embryo defective 1241)S.X.H.G.
0.4149.7Zm.18531.1.A1_atBE575145hypothetical protein LOC100192889-2e+0At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)S.X.H.G.
0.4048.5Zm.4193.1.A1_atAY106195.1DANA2-7e+0At5g19810proline-rich extensin-like family proteinS.X.H.G.
0.3945.6Zm.1006.1.A1_atBE639439--1e-16At2g14050MCM9S.X.H.G.
0.3742.3Zm.8060.1.A1_atBQ538589nodulin protein-2e-1At3g13857unknown proteinS.X.H.G.
0.3742.3Zm.8671.1.A1_atCO525023hypothetical protein LOC100272947-1e+0At1g70830MLP28 (MLP-LIKE PROTEIN 28)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
56.5100.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
27.699.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
22.499.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
21.099.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.599.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.199.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.299.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.398.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.997.3GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e+032Zm.477.2.A1_atAI737865hypothetical protein LOC100274928-2e-75At5g05780RPN8A (RP NON-ATPASE SUBUNIT 8A)C.G.S.X.
0.027e+030Zm.6701.1.A1_atAI619212glutaredoxin 2-9e-2At4g08280-C.G.S.X.
0.027e+030Zm.6701.1.S1_atCF628856--9e-2At4g08280-C.G.S.X.
0.017e+030Zm.5981.1.S1_atCO526206calmodulin binding protein-1e-2At2g26180IQD6 (IQ-domain 6)C.G.S.X.
0.017e+030Zm.5328.1.S1_atCD441067hypothetical protein LOC100280151-4e-40At2g36490DML1 (DEMETER-LIKE 1)C.G.S.X.
0.017e+030Zm.3583.1.A1_atAY103682.1hypothetical protein LOC100191673-4e-19At4g30600signal recognition particle receptor alpha subunit family proteinC.G.S.X.
0.027e+030Zm.3583.2.S1_atAY105229.1Hypothetical protein LOC100191673-2e+0At1g14980CPN10 (CHAPERONIN 10)C.G.S.X.
0.027e+030Zm.3583.2.A1_a_atAY105229.1hypothetical protein LOC100191673-2e+0At4g30600signal recognition particle receptor alpha subunit family proteinC.G.S.X.
0.037e+030Zm.2925.3.A1_atCF002413Ubiquitin-4e-41At2g47110UBQ6C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt5g22380832299anac090 (Arabidopsis NAC domain containing protein 90)F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P---C.G.S.X.
0.042e+034Glycine maxGmaAffx.25924.1.S1_atBU761485--1e-2At1g50930unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareHU14A08u_atHU14A08u--2e-2At5g51940NRPB6AC.G.S.X.
0.042e-344Oryza sativaOs04g06697009632.m05601-Phospholipase/Carboxylesterase family protein1e+0At2g20430RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6)C.G.S.X.
0.042e+034Populus trichocarpaPtpAffx.217982.1.S1_s_atpmrna33477hypothetical protein-3e-2At1g52260ATPDIL1-5 (PDI-LIKE 1-5)C.G.S.X.
0.044e+032Triticum aestivumTaAffx.119413.1.A1_atBJ273901--1e+0At5g14800P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE)C.G.S.X.
0.038e-236Vitis vinifera1610240_atCA809200--1e+0At1g76954-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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