CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Zm.11818.1.A1_at

Gene name cortical cell-delineating protein

Organism Zea mays

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 85.8 Zm.11818.1.A1_at BM380978 cortical cell-delineating protein - 2e-1 At5g23100 unknown protein S.X. H.G.
0.91 99.0 Zm.12002.1.A1_at BM382557 - - 1e+0 At4g21110 G10 family protein S.X. H.G.
0.91 99.0 Zm.15875.1.A1_at BM335822 - - 2e+0 At5g26848 unknown protein S.X. H.G.
0.83 95.6 Zm.15876.1.A1_at BM350760 - - 1e+0 At3g01940 unknown protein S.X. H.G.
0.30 29.8 Zm.13531.1.A1_at AY108355.1 transposon protein - 4e-1 At4g39260 GR-RBP8 S.X. H.G.
0.15 8.6 Zm.12351.1.A1_at BQ779084 HEC/Ndc80p family protein - 2e+0 At5g08391 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.6 99.1 GSM206299 Left pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
15.2 98.9 GSM206308 Lower pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
14.1 98.8 GSM206302 Upper pulvinus 15 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.9 98.7 GSM206306 Lower pulvinus 2 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.5 98.7 GSM206309 Lower pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.2 98.6 GSM206287 Left pulvinus control total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
12.0 98.6 GSM206305 Right pulvinus control polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
10.6 98.4 GSM206303 Upper pulvinus 30 min polysomal RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.8 98.3 GSM206296 Lower pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
9.7 98.3 GSM206290 Upper pulvinus 15 min total RNA biorep 1 GSE8320 Transcriptional and translational gene regulation in the maize pulvinus
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-4 44 Zm.2376.4.A1_x_at CK368489 cortical cell-delineating protein - 6e+0 At3g24510 - C.G. S.X.
0.02 3e-2 38 Zm.5104.1.A1_at AI615082 - - 4e-6 At3g05940 unknown protein C.G. S.X.
0.03 3e-2 38 Zm.3630.1.A1_at BM380179 - - 7e+0 At5g15000 - C.G. S.X.
0.03 3e-2 38 Zm.2376.1.A1_a_at AF001634.1 physical impedance induced protein /// cortical cell-delineating protein - 6e+0 At4g38130 HD1 (HISTONE DEACETYLASE 1) C.G. S.X.
0.03 3e-2 38 Zm.2376.1.A1_x_at AF001634.1 physical impedance induced protein - 6e+0 At4g38130 HD1 (HISTONE DEACETYLASE 1) C.G. S.X.
0.02 3e-2 38 Zm.15859.1.A1_at D14578.1 glutamine synthetase - 9e-22 At5g37600 ATGSR1 C.G. S.X.
0.02 1e-1 36 Zm.7117.2.A1_at CF627265 hypothetical protein LOC100273279 - 3e+0 At5g40155 - C.G. S.X.
0.03 1e-1 36 Zm.6336.1.A1_at AI691442 - - 9e-2 At5g60490 FLA12 C.G. S.X.
0.03 1e-1 36 Zm.2377.1.S1_at AY104113.1 hypothetical protein LOC100191708 - 3e+1 Atmg01260 - C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 36 Arabidopsis thaliana At5g23100 832374 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.03 3e-1 36 Glycine max PsAffx.psHB016xF08f_s_at PsAffx.psHB016xF08f - - 5e+0 At1g31310 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.13 8e-3 40 Hordeum vulgare EBro04_SQ001_J04_at EBro04_SQ001_J04 - - 3e+0 At4g12550 AIR1 C.G. S.X.
0.45 4e-63 242 Oryza sativa Os03g0718800 9631.m04980 - Physical impedance induced protein 3e+0 At1g67810 SUFE2 (SULFUR E 2) C.G. S.X.
0.04 3e-1 36 Populus trichocarpa PtpAffx.223595.1.S1_s_at pmrna41658 cytochrome P450 /// cytochrome P450 - 1e+0 At2g28400 unknown protein C.G. S.X.
0.36 3e-56 218 Triticum aestivum TaAffx.16112.1.S1_at CD490393 - - 1e+0 At3g05640 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.02 5e+0 30 Vitis vinifera 1619875_at CF206348.1 - - 2e-9 At3g22460 OASA2 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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